RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ZNF398Q8TD17 642 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 FAF2Q96CS3 445 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 ACAP3Q96P50 834 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 FAM213AQ9BRX8 229 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 TXNRD2Q9NNW7 524 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 ITGBL1O95965 494 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-206ENST00000397617 IL1BP01584 269 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 TYMPP19971 482 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 ZNF143P52747 638 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-206ENST00000397617 ZRSR2Q15696 482 aaKnown RBP6.2□□□□□ -1.42
PTPRD-206ENST00000397617 TFDP3Q5H9I0 405 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 RGMBQ6NW40 437 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 RBM12Q9NTZ6 932 aaKnown RBP6.2□□□□□ -1.42
PTPRD-206ENST00000397617 HACD3Q9P035 362 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 VPS18Q9P253 973 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 HPCAL4Q9UM19 191 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 HNRNPCL1O60812 293 aaKnown RBP6.2□□□□□ -1.42
PTPRD-206ENST00000397617 SLC10A3P09131 477 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 PIK3CAP42336 1068 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 NRG1Q02297 640 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-206ENST00000397617 EFHC1Q5JVL4 640 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 LEKR1Q6ZMV7 388 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 MCUQ8NE86 351 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 CNGB3Q9NQW8 809 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 HAUS2Q9NVX0 235 aa6.2□□□□□ -1.42
PTPRD-206ENST00000397617 SMG5Q9UPR3 1016 aaKnown RBP6.2□□□□□ -1.42
PTPRD-206ENST00000397617 TMCO5BA8MYB1 307 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 E7ESA3 106 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SEPT4O43236 478 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ATP2A2P16615 1042 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 CHRNB2P17787 502 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ARF4P18085 180 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 CDK18Q07002 472 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 TNFAIP8L3Q5GJ75 292 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PLA2G4FQ68DD2 849 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 KIAA0319LQ8IZA0 1049 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 EIF2B3Q9NR50 452 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 NUP205Q92621 2012 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 TLR3O15455 904 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PSEN1P49768 467 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SCNN1GP51170 649 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 RAD51AP2Q09MP3 1159 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ACVR2BQ13705 512 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ZNF365Q70YC5 407 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PDHXO00330 501 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SEC31AO94979 1220 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PLCB3Q01970 1234 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SP2Q02086 613 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 TMC3Q7Z5M5 1100 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SERINC5Q86VE9 423 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 LZTR1Q8N653 840 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 NLGN2Q8NFZ4 835 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 NT5C3BQ969T7 300 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ATP6V1G3Q96LB4 118 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 HACD1B0YJ81 288 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 BTBD19C9JJ37 291 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 LHX1P48742 406 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SV2CQ496J9 727 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 TREML2Q5T2D2 321 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 DCUN1D2Q6PH85 259 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 CCDC117Q8IWD4 279 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SPOCK2Q92563 424 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 MAGOHBQ96A72 148 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 C18orf25Q96B23 403 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PNKPQ96T60 521 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ELP3Q9H9T3 547 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ANAPC7Q9UJX3 599 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 GOLGA6CA6NDK9 693 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SOBPA7XYQ1 873 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 M0QZ92 97 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 GOLGA6DP0CG33 693 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 CYP2C9P11712 490 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 VCPP55072 806 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 DMTNQ08495 405 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 MFSD14CQ5VZR4 134 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ANKRD52Q8NB46 1076 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 CENPIQ92674 756 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PDE11AQ9HCR9 933 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 GOLGA6AQ9NYA3 693 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 KANSL3Q9P2N6 904 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ZMYM5Q9UJ78 669 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SALL4Q9UJQ4 1053 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 COMTP21964 271 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 MAP2K2P36507 400 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 MAMLD1Q13495 774 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ERICH1Q86X53 443 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PGBD4Q96DM1 585 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 NUP85Q9BW27 656 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 COMMD8Q9NX08 183 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 DDX20Q9UHI6 824 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 SLC12A6Q9UHW9 1150 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 MOXD2PA6NHM9 499 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 E7EVH7 732 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 MMP3P08254 477 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 RRM1P23921 792 aa6.19□□□□□ -1.42
PTPRD-206ENST00000397617 IRX1P78414 480 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 MAP2K1Q02750 393 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 ENOX2Q16206 610 aaKnown RBP6.19□□□□□ -1.42
PTPRD-206ENST00000397617 PKDCCQ504Y2 493 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms