RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 MAN1A1P33908 653 aa25.11■■□□□ 1.61
PABPN1-202ENST00000397276 PSMC4P43686 418 aa25.11■■□□□ 1.61
PABPN1-202ENST00000397276 ASPAP45381 313 aa25.11■■□□□ 1.61
PABPN1-202ENST00000397276 LACTBP83111 547 aaPredicted RBP25.11■■□□□ 1.61
PABPN1-202ENST00000397276 WDR72Q3MJ13 1102 aa25.11■■□□□ 1.61
PABPN1-202ENST00000397276 PLPPR4Q7Z2D5 763 aa25.11■■□□□ 1.61
PABPN1-202ENST00000397276 OPTNQ96CV9 577 aa25.11■■□□□ 1.61
PABPN1-202ENST00000397276 XYLT2Q9H1B5 865 aa25.11■■□□□ 1.61
PABPN1-202ENST00000397276 ACKR2O00590 384 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 TNNC2P02585 160 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 ZSCAN5DPP0CG00 497 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 MMP13P45452 471 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 IFNAR2P48551 515 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 TRMT10CQ7L0Y3 403 aaKnown RBP25.1■■□□□ 1.61
PABPN1-202ENST00000397276 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.1■■□□□ 1.61
PABPN1-202ENST00000397276 ANKRD36BP1Q96IX9 119 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 C2orf40Q9H1Z8 148 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 DNPEPQ9ULA0 475 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 AGTP01019 485 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 CALB1P05937 261 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 ACCSLQ4AC99 568 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 HIBCHQ6NVY1 386 aaPredicted RBP25.1■■□□□ 1.61
PABPN1-202ENST00000397276 DENND1BQ6P3S1 775 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 TSHZ1Q6ZSZ6 1077 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 CHMP6Q96FZ7 201 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 TRAIPQ9BWF2 469 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 CYP2C8P10632 490 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 ETS1P14921 441 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 CREB1P16220 341 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 XRCC4Q13426 336 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 LACTB2Q53H82 288 aaPredicted RBP25.1■■□□□ 1.61
PABPN1-202ENST00000397276 ERMARDQ5T6L9 678 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 IZUMO3Q5VZ72 239 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 CCDC62Q6P9F0 684 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 C3orf20Q8ND61 904 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 FHDC1Q9C0D6 1143 aaPredicted RBP25.1■■□□□ 1.61
PABPN1-202ENST00000397276 PTPRHQ9HD43 1115 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 ZNF148Q9UQR1 794 aa25.1■■□□□ 1.61
PABPN1-202ENST00000397276 MGARPQ8TDB4 240 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 C9orf72Q96LT7 481 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 SLITRK1Q96PX8 696 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 PRMT1Q99873 361 aaKnown RBP25.09■■□□□ 1.61
PABPN1-202ENST00000397276 CDT1Q9H211 546 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 FZD8Q9H461 694 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 SMARCAD1Q9H4L7 1026 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 BAIAP2L1Q9UHR4 511 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 LOC285556D6RIA3 1793 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 CXCL11O14625 94 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 ELF3P78545 371 aaPredicted RBP25.09■■□□□ 1.61
PABPN1-202ENST00000397276 GRM1Q13255 1194 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 SMTNL2Q2TAL5 461 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 P3H1Q32P28 736 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 SYDE1Q6ZW31 735 aaPredicted RBP25.09■■□□□ 1.61
PABPN1-202ENST00000397276 DPH6Q7L8W6 267 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 CDCA5Q96FF9 252 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 RPF1Q9H9Y2 349 aaKnown RBP25.09■■□□□ 1.61
PABPN1-202ENST00000397276 INTS9Q9NV88 658 aaKnown RBP25.09■■□□□ 1.61
PABPN1-202ENST00000397276 TBK1Q9UHD2 729 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 GGT7Q9UJ14 662 aa25.09■■□□□ 1.61
PABPN1-202ENST00000397276 SIP14410 1827 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 SPDYE5A6NIY4 337 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 GPR25O00155 361 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 NFICP08651 508 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 CETN2P41208 172 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 TFDP1Q14186 410 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 HP1BP3Q5SSJ5 553 aaPredicted RBP25.08■■□□□ 1.61
PABPN1-202ENST00000397276 CPB2Q96IY4 423 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 HOMER3Q9NSC5 361 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 NEU2Q9Y3R4 380 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 DNAJC25-GNG10A0A024R161 153 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 LRRD1A4D1F6 860 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 TTC4O95801 387 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 PROZP22891 400 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 MBTD1Q05BQ5 628 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 LRRC14Q15048 493 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 KCNT1Q5JUK3 1230 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 EXOC3L1Q86VI1 746 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 CCDC89Q8N998 374 aa25.08■■□□□ 1.61
PABPN1-202ENST00000397276 GAS2O43903 313 aaKnown RBP25.07■■□□□ 1.6
PABPN1-202ENST00000397276 ADCY1Q08828 1119 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 RCOR2Q8IZ40 523 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 ZNF317Q96PQ6 595 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-202ENST00000397276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.07■■□□□ 1.62e-20■■■□□ 19.2
PABPN1-202ENST00000397276 SAE1Q9UBE0 346 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-202ENST00000397276 CYTH4Q9UIA0 394 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 RFC1P35251 1148 aaPredicted RBP25.07■■□□□ 1.6
PABPN1-202ENST00000397276 DYNLT1P63172 113 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 PLCB3Q01970 1234 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 SURF1Q15526 300 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 MIEF2Q96C03 454 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 FAM129AQ9BZQ8 928 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 ZWILCHQ9H900 591 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 MLXIPLQ9NP71 852 aa25.07■■□□□ 1.6
PABPN1-202ENST00000397276 A0A087WZ62 844 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 TCRBV5S1A1TA0A578 114 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 CCT8L1PA6NM43 557 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 MGRN1O60291 552 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 HBP1O60381 514 aa25.06■■□□□ 1.6
PABPN1-202ENST00000397276 LSM8O95777 96 aaKnown RBP25.06■■□□□ 1.6
PABPN1-202ENST00000397276 CHRM1P11229 460 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms