RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 LRMPQ12912 555 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 GPR17Q13304 367 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 KCNC3Q14003 757 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 ARHGEF19Q8IW93 802 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 DCP1BQ8IZD4 617 aaKnown RBP17.54■□□□□ 0.4
AP1S3-202ENST00000396653 PPM1KQ8N3J5 372 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 UBR7Q8N806 425 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 SLC22A17Q8WUG5 538 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 HDAC7Q8WUI4 952 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 SYT15Q9BQS2 421 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 DNAI2Q9GZS0 605 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 SIX2Q9NPC8 291 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 PLCB1Q9NQ66 1216 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 DPP7Q9UHL4 492 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 NME7Q9Y5B8 376 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 HCFC2Q9Y5Z7 792 aa17.54■□□□□ 0.4
AP1S3-202ENST00000396653 WDR27A2RRH5 827 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 A8MXQ7 604 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 ABLIM3O94929 683 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 WEE2P0C1S8 567 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 SRGAP2BP0DMP2 458 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 TRIM21P19474 475 aaKnown RBP17.53■□□□□ 0.4
AP1S3-202ENST00000396653 UBXN1Q04323 297 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 MAPRE1Q15691 268 aaKnown RBP17.53■□□□□ 0.4
AP1S3-202ENST00000396653 PHLDB3Q6NSJ2 640 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 LILRA6Q6PI73 481 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 ELMSAN1Q6PJG2 1045 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 TMEM184AQ6ZMB5 413 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 RBM23Q86U06 439 aaKnown RBP17.53■□□□□ 0.4
AP1S3-202ENST00000396653 ZNF461Q8TAF7 563 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 C2orf15Q8WU43 125 aaKnown RBP17.53■□□□□ 0.4
AP1S3-202ENST00000396653 TNIP3Q96KP6 325 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 PKMYT1Q99640 499 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 ARID3AQ99856 593 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 CISHQ9NSE2 258 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 HSFX1Q9UBD0 423 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 AFF4Q9UHB7 1163 aaKnown RBP17.53■□□□□ 0.4
AP1S3-202ENST00000396653 FBXW11Q9UKB1 542 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
AP1S3-202ENST00000396653 A0A1W2PQC6 194 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 PER2O15055 1255 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 TGM5O43548 720 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 LMO2P25791 158 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 NDST1P52848 882 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 MFAP3P55082 362 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 NFE2Q16621 373 aaPredicted RBP17.52■□□□□ 0.4
AP1S3-202ENST00000396653 DPY19L2P1Q6NXN4 242 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 FAM171BQ6P995 826 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 RTL10Q7L3V2 364 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 GAS2L3Q86XJ1 694 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 GLYCTKQ8IVS8 523 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 MICALL1Q8N3F8 863 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 CASP10Q92851 521 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 TMEM209Q96SK2 561 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
AP1S3-202ENST00000396653 NT5C1AQ9BXI3 368 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 PLEKHA4Q9H4M7 779 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 DZANK1Q9NVP4 752 aa17.52■□□□□ 0.4
AP1S3-202ENST00000396653 MTMR11A4FU01 709 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 OR4Q2P0C623 313 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 ATF2P15336 505 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 CD58P19256 250 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 ACAT1P24752 427 aaKnown RBP17.51■□□□□ 0.39
AP1S3-202ENST00000396653 UBASH3AP57075 661 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 ADAM15Q13444 863 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 NR1I3Q14994 352 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 SYCP1Q15431 976 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 CTC1Q2NKJ3 1217 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 RRAGAQ7L523 313 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 PALB2Q86YC2 1186 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 CRYBG2Q8N1P7 616 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 B3GALNT2Q8NCR0 500 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 SPPL2BQ8TCT7 592 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 WHAMMQ8TF30 809 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 PABPC5Q96DU9 382 aaKnown RBP17.51■□□□□ 0.39
AP1S3-202ENST00000396653 KREMEN1Q96MU8 473 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 NAP1L5Q96NT1 182 aaPredicted RBP17.51■□□□□ 0.39
AP1S3-202ENST00000396653 RBSNQ9H1K0 784 aa17.51■□□□□ 0.39
AP1S3-202ENST00000396653 UBE2TQ9NPD8 197 aaPredicted RBP17.51■□□□□ 0.39
AP1S3-202ENST00000396653 TEX33O43247 280 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 CBFA2T2O43439 604 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 HCRTO43612 131 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 GLP2RO95838 553 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 TPM3P06753 285 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 PDGFRBP09619 1106 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 EPCAMP16422 314 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 PTPN1P18031 435 aaKnown RBP17.5■□□□□ 0.39
AP1S3-202ENST00000396653 ACO1P21399 889 aaKnown RBP17.5■□□□□ 0.39
AP1S3-202ENST00000396653 GTF2F1P35269 517 aaKnown RBP eCLIP17.5■□□□□ 0.39
AP1S3-202ENST00000396653 ARPP19P56211 112 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 PSMC1P62191 440 aaKnown RBP17.5■□□□□ 0.39
AP1S3-202ENST00000396653 SLC39A12Q504Y0 691 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 KLHDC7AQ5VTJ3 777 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 RNF19BQ6ZMZ0 732 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 C4orf50Q6ZRC1 276 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 CCDC149Q6ZUS6 474 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 LRRTM3Q86VH5 581 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 KREMEN2Q8NCW0 462 aa17.5■□□□□ 0.39
AP1S3-202ENST00000396653 VN1R2Q8NFZ6 395 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms