RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 ECHDC2Q86YB7 292 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 MMGT1Q8N4V1 131 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 SPATA18Q8TC71 538 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 DDX27Q96GQ7 796 aaKnown RBP12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 HEXIM2Q96MH2 286 aaKnown RBP12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 ZFP42Q96MM3 310 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 DEFB118Q96PH6 123 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 GAD1Q99259 594 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 SELENOOQ9BVL4 669 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 WNT8AQ9H1J5 351 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 CARD9Q9H257 536 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 MIOSQ9NXC5 875 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 WDR35Q9P2L0 1181 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 HMGXB4Q9UGU5 601 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 STRIP2Q9ULQ0 834 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 HTTP42858 3142 aa12.62□□□□□ -0.39
GTF2A2-202ENST00000396060 MEIS3P2A8K0S8 358 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 TFRCP02786 760 aaKnown RBP12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 SETSIPP0DME0 302 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 MAN1A1P33908 653 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 GPD2P43304 727 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 AARSP49588 968 aaKnown RBP eCLIP12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 PEX5P50542 639 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 ZNF268Q14587 947 aaPredicted RBP12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 NAA30Q147X3 362 aaPredicted RBP12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 MTFR1Q15390 333 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 CLUL1Q15846 466 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 PKDCCQ504Y2 493 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 PPP1R15BQ5SWA1 713 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 MMS22LQ6ZRQ5 1243 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 SLC24A5Q71RS6 500 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 ANKRD33Q7Z3H0 272 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 ERICH1Q86X53 443 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 KBTBD7Q8WVZ9 684 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 TOX2Q96NM4 488 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 C11orf70Q9BRQ4 267 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 GOLPH3Q9H4A6 298 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 RSAD1Q9HA92 442 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 TMEM59LQ9UK28 342 aa12.61□□□□□ -0.39
GTF2A2-202ENST00000396060 TMEM191CA6NGB0 347 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 MYO1FO00160 1098 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 KCNK3O14649 394 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 GABRDO14764 452 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 HUS1O60921 280 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 MICAL2O94851 1124 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 PROSCO94903 275 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 PARNO95453 639 aaKnown RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 CAPN2P17655 700 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 COMTP21964 271 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 GNL1P36915 607 aaPredicted RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 MLH1P40692 756 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 LRRC8DQ7L1W4 858 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 TMEM86AQ8N2M4 240 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 MSANTD4Q8NCY6 345 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 C3orf20Q8ND61 904 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 C1orf131Q8NDD1 294 aaKnown RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 FEZF2Q8TBJ5 459 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 TSC1Q92574 1164 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 UROC1Q96N76 676 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 MIS12Q9H081 205 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 RNF208Q9H0X6 261 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 PACSIN2Q9UNF0 486 aaPredicted RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 NME7Q9Y5B8 376 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 CCDC66A2RUB6 948 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 CXCR5P32302 372 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 CTNNA1P35221 906 aaKnown RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 RPL34P49207 117 aaKnown RBP12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 GRIK3Q13003 919 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 MESDQ14696 234 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 GPNMBQ14956 572 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 ELF2Q15723 593 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 UPP1Q16831 310 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 UBL4BQ8N7F7 174 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 LPPQ93052 612 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 CAPZA3Q96KX2 299 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 CYLDQ9NQC7 956 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 CYTH4Q9UIA0 394 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 L1RE1Q9UN81 338 aa12.6□□□□□ -0.39
GTF2A2-202ENST00000396060 TARSL2A2RTX5 802 aaKnown RBP12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 SIGLEC16A6NMB1 481 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 PODXLO00592 558 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 FGFR1P11362 822 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 SCNN1GP51170 649 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 AFF1P51825 1210 aaKnown RBP12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 TUSC3Q13454 348 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 PTPN20Q4JDL3 420 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 CCDC181Q5TID7 509 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 PDCL2Q8N4E4 241 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 DNAJC5GQ8N7S2 189 aa12.59□□□□□ -0.39
GTF2A2-202ENST00000396060 NIPA2Q8N8Q9 360 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms