RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 LHX1P48742 406 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 ORC1Q13415 861 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 CLEC16AQ2KHT3 1053 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 TMCO2Q7Z6W1 182 aaPredicted RBP16.09■□□□□ 0.17
PTPN20-206ENST00000395722 HASPINQ8TF76 798 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 ATRIPQ8WXE1 791 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 COLEC11Q9BWP8 271 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 ISCUQ9H1K1 167 aa16.09■□□□□ 0.17
PTPN20-206ENST00000395722 TRMT1Q9NXH9 659 aaKnown RBP16.09■□□□□ 0.17
PTPN20-206ENST00000395722 PRG3Q9Y2Y8 225 aaPredicted RBP16.09■□□□□ 0.17
PTPN20-206ENST00000395722 MKI67P46013 3256 aaKnown RBP16.09■□□□□ 0.17
PTPN20-206ENST00000395722 CCDC85CA6NKD9 419 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 A8MXQ7 604 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 O00370 1275 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 EFEMP2O95967 443 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 UNGP13051 313 aaPredicted RBP16.08■□□□□ 0.16
PTPN20-206ENST00000395722 CDH5P33151 784 aaPredicted RBP16.08■□□□□ 0.16
PTPN20-206ENST00000395722 HTRA4P83105 476 aaPredicted RBP16.08■□□□□ 0.16
PTPN20-206ENST00000395722 CNGA2Q16280 664 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 RASIP1Q5U651 963 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 LUC7LQ9NQ29 371 aaKnown RBP16.08■□□□□ 0.16
PTPN20-206ENST00000395722 TAS2R14Q9NYV8 317 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
PTPN20-206ENST00000395722 ADAM28Q9UKQ2 775 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 INTUQ9ULD6 942 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 FAN1Q9Y2M0 1017 aa16.08■□□□□ 0.16
PTPN20-206ENST00000395722 GOLGA6L9A6NEM1 432 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 MED7O43513 233 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 HCRTO43612 131 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 RTN2O75298 545 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 LSM8O95777 96 aaKnown RBP16.07■□□□□ 0.16
PTPN20-206ENST00000395722 CD19P15391 556 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 BCAR1P56945 870 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 SGO2Q562F6 1265 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 ARHGAP17Q68EM7 881 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 ACOT1Q86TX2 421 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 HEXIM2Q96MH2 286 aaKnown RBP16.07■□□□□ 0.16
PTPN20-206ENST00000395722 RTP3Q9BQQ7 232 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 LACRTQ9GZZ8 138 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 DPEP3Q9H4B8 488 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
PTPN20-206ENST00000395722 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTPN20-206ENST00000395722 SYN3O14994 580 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 GJB5O95377 273 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 NOMO3P69849 1222 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 CENPCQ03188 943 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 STILQ15468 1287 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 LCLAT1Q6UWP7 414 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 DPF3Q92784 378 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 TNIP3Q96KP6 325 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 PACSIN1Q9BY11 444 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
PTPN20-206ENST00000395722 SEPT11Q9NVA2 429 aaKnown RBP16.07■□□□□ 0.16
PTPN20-206ENST00000395722 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
PTPN20-206ENST00000395722 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 TADA2AO75478 443 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 PDGFRBP09619 1106 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 KIAA0319Q5VV43 1072 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 ACAD10Q6JQN1 1059 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 FAM117BQ6P1L5 589 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 KIAA1328Q86T90 577 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 TMEM173Q86WV6 379 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-206ENST00000395722 METTL23Q86XA0 190 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 TXLNBQ8N3L3 684 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 PHOSPHO2Q8TCD6 241 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 BCL7CQ8WUZ0 217 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-206ENST00000395722 CYFIP2Q96F07 1278 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 SLC9A7Q96T83 725 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 LBHD1Q9BQE6 289 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-206ENST00000395722 DDX43Q9NXZ2 648 aaKnown RBP16.06■□□□□ 0.16
PTPN20-206ENST00000395722 VWA8A3KMH1 1905 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 CARNS1A5YM72 827 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 OAZ2O95190 189 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 H2AFZP0C0S5 128 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 FGFR3P22607 806 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 GALCP54803 685 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 BTG3Q14201 252 aaPredicted RBP16.06■□□□□ 0.16
PTPN20-206ENST00000395722 PKDCCQ504Y2 493 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 PPP1R2P3Q6NXS1 205 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 DENND1BQ6P3S1 775 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 H2AFVQ71UI9 128 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 WDTC1Q8N5D0 677 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 C12orf29Q8N999 325 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 B3GALNT2Q8NCR0 500 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 ZNF518BQ9C0D4 1074 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 CDH9Q9ULB4 789 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 TFR2Q9UP52 801 aa16.06■□□□□ 0.16
PTPN20-206ENST00000395722 MRPL42Q9Y6G3 142 aaKnown RBP16.06■□□□□ 0.16
PTPN20-206ENST00000395722 SF3B1O75533 1304 aaKnown RBP eCLIP16.05■□□□□ 0.16
PTPN20-206ENST00000395722 ANKRD62A6NC57 917 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 BTNL10A8MVZ5 291 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 MICAL2O94851 1124 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 ABL1P00519 1130 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 FTLP02792 175 aaPredicted RBP16.05■□□□□ 0.16
PTPN20-206ENST00000395722 PTPN1P18031 435 aaKnown RBP16.05■□□□□ 0.16
PTPN20-206ENST00000395722 PCSK1P29120 753 aa16.05■□□□□ 0.16
PTPN20-206ENST00000395722 ELAVL2Q12926 359 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms