RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 SRPK3Q9UPE1 567 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 USP16Q9Y5T5 823 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 EIF3AQ14152 1382 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 UHRF1BP1LA0JNW5 1464 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 GOLGA8IPA6NC78 632 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 GOLGA6L4A6NEF3 574 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SYNCRIPO60506 623 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 PEX11AO75192 247 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 FSBPO95073 299 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SRGAP2CP0DJJ0 459 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 TIMP2P16035 220 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 UBE2HP62256 183 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 GRSF1Q12849 480 aaKnown RBP eCLIP4.5□□□□□ -1.69
HERC4-204ENST00000395198 KYAT1Q16773 422 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 CCDC40Q4G0X9 1142 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ZNF765Q7L2R6 523 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 STK32CQ86UX6 486 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SYT2Q8N9I0 419 aaPredicted RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 PNMA1Q8ND90 353 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 GRIN3AQ8TCU5 1115 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 KHSRPQ92945 711 aaKnown RBP eCLIP4.5□□□□□ -1.697e-7■■■■□ 19.5
HERC4-204ENST00000395198 SPACA9Q96E40 222 aaPredicted RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 DTNBP1Q96EV8 351 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 RBM42Q9BTD8 480 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 PANK2Q9BZ23 570 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 SPACA1Q9HBV2 294 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 INTS7Q9NVH2 962 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 SOHLH2Q9NX45 425 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 WHRNQ9P202 907 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 STX8Q9UNK0 236 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 PIN4Q9Y237 131 aaKnown RBP4.5□□□□□ -1.69
HERC4-204ENST00000395198 CLEC11AQ9Y240 323 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ATP6V1DQ9Y5K8 247 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 ADCY10Q96PN6 1610 aa4.5□□□□□ -1.69
HERC4-204ENST00000395198 CAPN8A6NHC0 703 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GCATO75600 419 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TPBGLP0DKB5 382 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 NAGAP17050 411 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PRKACBP22694 351 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PSMD7P51665 324 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 ABATP80404 500 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PRKCEQ02156 737 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 BFSP1Q12934 665 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 MOGQ16653 247 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 FNDC3BQ53EP0 1204 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 NBPF14Q5TI25 921 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 C16orf46Q6P387 395 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 KDM7AQ6ZMT4 941 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 BICDL1Q6ZP65 573 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 KRT27Q7Z3Y8 459 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SLITRK4Q8IW52 837 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 ATG16L2Q8NAA4 619 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GLB1L3Q8NCI6 653 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 SPDYE1Q8NFV5 336 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 OR8K3Q8NH51 312 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 RFFLQ8WZ73 363 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 IRGQQ8WZA9 623 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TNFRSF25Q93038 417 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 FAM84AQ96KN4 292 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 FCRL4Q96PJ5 515 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 KCNC2Q96PR1 638 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SECISBP2Q96T21 854 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 AGAP2Q99490 1192 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 C9orf16Q9BUW7 83 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 HSD3B7Q9H2F3 369 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 XKR8Q9H6D3 395 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 HAUS4Q9H6D7 363 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SARS2Q9NP81 518 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 AGPAT3Q9NRZ7 376 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 FAM8A1Q9UBU6 413 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 IL19Q9UHD0 177 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 MEX3AA1L020 520 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 DVL2O14641 736 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 AXIN1O15169 862 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SULT1B1O43704 296 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 CBR3O75828 277 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 C22orf31O95567 290 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PTBP3O95758 552 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 HLA-DRAP01903 254 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 NR3C2P08235 984 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 CASP9P55211 416 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 TBC1D9BQ66K14 1250 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 CENPPQ6IPU0 288 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 C8orf74Q6P047 294 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 RFX8Q6ZV50 586 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PPM1KQ8N3J5 372 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SLC7A14Q8TBB6 771 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 LRFN3Q9BTN0 628 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GPR62Q9BZJ7 368 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 FANCEQ9HB96 536 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 A1CFQ9NQ94 594 aaKnown RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 KIF17Q9P2E2 1029 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 GAB2Q9UQC2 676 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 ZNF891A8MT65 544 aaPredicted RBP4.49□□□□□ -1.69
HERC4-204ENST00000395198 KIF28PB7ZC32 967 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 NT5C1B-RDH14C9J2C7 533 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 EFCAB14O75071 495 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 PRDM1O75626 825 aa4.49□□□□□ -1.69
HERC4-204ENST00000395198 SOD2P04179 222 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms