RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 MAP2K3P46734 347 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 KCNJ6P48051 423 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 CDK17Q00537 523 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 APBA1Q02410 837 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 HYAL2Q12891 473 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 MEA1Q16626 185 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 UBXN11Q5T124 520 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 WDR59Q6PJI9 974 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 USP38Q8NB14 1042 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 FBXL13Q8NEE6 735 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 SEMA4DQ92854 862 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 FRMD6Q96NE9 622 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 INTS2Q9H0H0 1204 aaKnown RBP12.28□□□□□ -0.44
RTN1-203ENST00000395090 IGFLR1Q9H665 355 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 ASB7Q9H672 318 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 AGO3Q9H9G7 860 aaKnown RBP12.28□□□□□ -0.44
RTN1-203ENST00000395090 RPF1Q9H9Y2 349 aaKnown RBP12.28□□□□□ -0.44
RTN1-203ENST00000395090 RAB20Q9NX57 234 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 SALL4Q9UJQ4 1053 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 ST3GAL5Q9UNP4 418 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 PTPRJQ12913 1337 aa12.28□□□□□ -0.44
RTN1-203ENST00000395090 RPS6KA5O75582 802 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 ARAFP10398 606 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 COL6A1P12109 1028 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 CAPN2P17655 700 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 VAMP1P23763 118 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 GJA8P48165 433 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.44
RTN1-203ENST00000395090 OSTNP61366 133 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 DUOXA2Q1HG44 320 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 FBXO47Q5MNV8 452 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 ALKAL1Q6UXT8 129 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 TMTC1Q8IUR5 882 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 CD302Q8IX05 232 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 COL25A1Q9BXS0 654 aaPredicted RBP12.27□□□□□ -0.44
RTN1-203ENST00000395090 EIF2AQ9BY44 585 aaKnown RBP12.27□□□□□ -0.44
RTN1-203ENST00000395090 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 AIPL1Q9NZN9 384 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.44
RTN1-203ENST00000395090 MROH7Q68CQ1 1323 aa12.27□□□□□ -0.45
RTN1-203ENST00000395090 LACTBL1A8MY62 500 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 NRDCO43847 1150 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 ZC3H11AO75152 810 aaKnown RBP eCLIP12.26□□□□□ -0.45
RTN1-203ENST00000395090 LRRN2O75325 713 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 KIF4AO95239 1232 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 NPTXRO95502 500 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 TFRCP02786 760 aaKnown RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 CTSHP09668 335 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 CXCL8P10145 99 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 JAM2P57087 298 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 GPLD1P80108 840 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 LPIN1Q14693 890 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 PCSK7Q16549 785 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 TDRD10Q5VZ19 366 aaKnown RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 SLC39A5Q6ZMH5 540 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 RRAGAQ7L523 313 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 ANKRD33Q7Z3H0 272 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 CACNA2D4Q7Z3S7 1137 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 OR5B17Q8NGF7 314 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 CAGE1Q8TC20 777 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 KIAA1524Q8TCG1 905 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 TAS1R2Q8TE23 839 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 NSUN5Q96P11 429 aaKnown RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 CCDC94Q9BW85 323 aaPredicted RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 STK33Q9BYT3 514 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 OSBPL7Q9BZF2 842 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 UBE2OQ9C0C9 1292 aaKnown RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 PADI3Q9ULW8 664 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 PYCARDQ9ULZ3 195 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 PIN4Q9Y237 131 aaKnown RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 LRRC53A6NM62 1247 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 ARHGAP6O43182 974 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 VNN1O95497 513 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 ADH6P28332 368 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 NFX1Q12986 1120 aaKnown RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 ZBTB6Q15916 424 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 XKR4Q5GH76 650 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 COL13A1Q5TAT6 717 aaPredicted RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 IQCEQ6IPM2 695 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 FAM43BQ6ZT52 329 aaPredicted RBP12.26□□□□□ -0.45
RTN1-203ENST00000395090 TRAPPC11Q7Z392 1133 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 NT5DC4Q86YG4 428 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 IRF7Q92985 503 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 TOX2Q96NM4 488 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 TSPAN18Q96SJ8 248 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 NLRC4Q9NPP4 1024 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 KCND1Q9NSA2 647 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 C2CD2Q9Y426 696 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 FHOD1Q9Y613 1164 aa12.26□□□□□ -0.45
RTN1-203ENST00000395090 HLA-DRAP01903 254 aa12.25□□□□□ -0.45
RTN1-203ENST00000395090 MRPL58Q14197 206 aaKnown RBP12.25□□□□□ -0.45
RTN1-203ENST00000395090 MBTPS1Q14703 1052 aa12.25□□□□□ -0.45
RTN1-203ENST00000395090 RNFT1Q5M7Z0 435 aa12.25□□□□□ -0.45
RTN1-203ENST00000395090 E4F1Q66K89 784 aaPredicted RBP12.25□□□□□ -0.45
RTN1-203ENST00000395090 LMBRD2Q68DH5 695 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms