RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IRF6O14896 467 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 DGAT1O75907 488 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 IREB2P48200 963 aaKnown RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 SPARCL1Q14515 664 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 DRICH1Q6PGQ1 229 aaPredicted RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 RGS9BPQ6ZS82 235 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 ALLCQ8N6M5 410 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 RBBP8NLQ8NC74 664 aaPredicted RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 OTUD5Q96G74 571 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 HAPLN2Q9GZV7 340 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 PARVAQ9NVD7 372 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 SEPT9Q9UHD8 586 aaPredicted RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 IP6K2Q9UHH9 426 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 ATF7P17544 494 aaPredicted RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 SLC18A1P54219 525 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 YARSP54577 528 aaKnown RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 ATP11AP98196 1134 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 GPS1Q13098 491 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 SWSAP1Q6NVH7 229 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 CAPN12Q6ZSI9 719 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 C4orf33Q8N1A6 199 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 ATP6V0A1Q93050 837 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 ERP27Q96DN0 273 aa19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 RBM41Q96IZ5 413 aaKnown RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 AGO2Q9UKV8 859 aaKnown RBP19.36■□□□□ 0.69
PCDHA1-202ENST00000394633 VWA5AO00534 786 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 WFS1O76024 890 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 ECM2O94769 699 aaPredicted RBP19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 KRT1P04264 644 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 RPA3P35244 121 aaPredicted RBP19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 CETN2P41208 172 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 ZNF252P-AS1Q0IIN9 211 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 PDK4Q16654 411 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 TREML2Q5T2D2 321 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 RAB3IPQ96QF0 476 aaPredicted RBP19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 RRAGCQ9HB90 399 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 CNTN6Q9UQ52 1028 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 USH1CQ9Y6N9 552 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 C19orf81C9J6K1 198 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 EDF1O60869 148 aaKnown RBP19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 KCNA2P16389 499 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 KRT15P19012 456 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 SLC1A5Q15758 541 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 ZFYVE27Q5T4F4 411 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 VSIG10LQ86VR7 867 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 ZBTB45Q96K62 511 aaPredicted RBP19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 LRMDAQ9H2I8 198 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 ZNF408Q9H9D4 720 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 VPS37BQ9H9H4 285 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 CYP26B1Q9NR63 512 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 NUB1Q9Y5A7 615 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 STYXL1Q9Y6J8 313 aa19.35■□□□□ 0.69
PCDHA1-202ENST00000394633 TJP3O95049 919 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 PRKCEQ02156 737 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 BAATQ14032 418 aaPredicted RBP19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 SETDB1Q15047 1291 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 ZBTB41Q5SVQ8 909 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 RNASEH2BQ5TBB1 312 aaKnown RBP19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 SCARA3Q6AZY7 606 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 SPOCD1Q6ZMY3 1216 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 VSIG1Q86XK7 387 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 GPRASP2Q96D09 838 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 TMEM237Q96Q45 408 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 SMC6Q96SB8 1091 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 SLC5A4Q9NY91 659 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 SMG5Q9UPR3 1016 aaKnown RBP19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 IVNS1ABPQ9Y6Y0 642 aa19.34■□□□□ 0.69
PCDHA1-202ENST00000394633 A0A1W2PPM1 405 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 TMEM191CA6NGB0 347 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 ALOX15BO15296 676 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 TMEM191BP0C7N4 346 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 TARSP26639 723 aaKnown RBP19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 CCND2P30279 289 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 SP4Q02446 784 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 MORF4L2Q15014 288 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 OASLQ15646 514 aaKnown RBP19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 PARP6Q2NL67 630 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 TXNRD3NBQ6F5E7 133 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 CCDC60Q8IWA6 550 aaPredicted RBP19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 ANKRD13AQ8IZ07 590 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 DRG1Q9Y295 367 aaKnown RBP19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 RIPK3Q9Y572 518 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 CEP83Q9Y592 693 aa19.33■□□□□ 0.69
PCDHA1-202ENST00000394633 H0YCG3 227 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 PEX10O60683 326 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 ZBED4O75132 1171 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 ATP5HO75947 161 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 NR3C2P08235 984 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 ATP2A2P16615 1042 aaKnown RBP19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 MMP8P22894 467 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 NOP14P78316 857 aaKnown RBP19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 WDR72Q3MJ13 1102 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 ZBED8Q8IZ13 594 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 LRRC8CQ8TDW0 803 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 ZNF526Q8TF50 670 aaPredicted RBP19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 C10orf82Q8WW14 230 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 ACSF2Q96CM8 615 aaPredicted RBP19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 HAUS1Q96CS2 278 aa19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 MRRFQ96E11 262 aaKnown RBP19.33■□□□□ 0.68
PCDHA1-202ENST00000394633 LRRC37BQ96QE4 947 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms