RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 C16orf87Q6PH81 154 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 HIPK4Q8NE63 616 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 AFG1LQ8WV93 481 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CFAP57Q96MR6 1250 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 AGPAT1Q99943 283 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CBWD1Q9BRT8 395 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 NUF2Q9BZD4 464 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 PHACTR1Q9C0D0 580 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 VPS37BQ9H9H4 285 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 RNPEPL1Q9HAU8 725 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 PALMDQ9NP74 551 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ANLNQ9NQW6 1124 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 COL20A1Q9P218 1284 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 HAO1Q9UJM8 370 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 A0A0G2JLL6 359 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 TMEM150BA6NC51 233 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 I3L4J1 428 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 NDC80O14777 642 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 HAUS5O94927 633 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 LYPLA2O95372 231 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ALDH1A1P00352 501 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ATP6V1C1P21283 382 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 UBA1P22314 1058 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 KLRC1P26715 233 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 PEX5P50542 639 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 GNASQ5JWF2 1037 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 PRRT2Q7Z6L0 340 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 GLYCTKQ8IVS8 523 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CXorf38Q8TB03 319 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 STK32AQ8WU08 396 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ZBED3Q96IU2 234 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 MPP4Q96JB8 637 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 DNAJC7Q99615 494 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 BTBD7Q9P203 1132 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 DCTN4Q9UJW0 460 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 WDR91A4D1P6 747 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 H3BRB1 525 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 MCF2LO15068 1137 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 TTI1O43156 1089 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 FTLP02792 175 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 MX2P20592 715 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 PON1P27169 355 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 AMPD2Q01433 879 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 TAF12Q16514 161 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 SGSM1Q2NKQ1 1148 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ZNF394Q53GI3 561 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ZC3H12AQ5D1E8 599 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 ARSHQ5FYA8 562 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CELF3Q5SZQ8 465 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 C1orf146Q5VVC0 180 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 SNX30Q5VWJ9 437 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 IQSEC1Q6DN90 963 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CCDC60Q8IWA6 550 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 TTC39CQ8N584 583 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 TMEM35BQ8NCS4 154 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 RNF34Q969K3 372 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 NDEL1Q9GZM8 345 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 TUT1Q9H6E5 874 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 METTL5Q9NRN9 209 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 CYP26A1O43174 497 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ZWINTO95229 277 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 RARBP10826 455 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 GTF2H1P32780 548 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ADCY8P40145 1251 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 SOX10P56693 466 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 MAP3K10Q02779 954 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 MCL1Q07820 350 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 LACTB2Q53H82 288 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 CYP4F22Q6NT55 531 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 DNAJC24Q6P3W2 148 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 DLK2Q6UY11 383 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 METTL23Q86XA0 190 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CBWD2Q8IUF1 395 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 WDR75Q8IWA0 830 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 ABI1Q8IZP0 508 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 GLIS3Q8NEA6 775 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 TMC2Q8TDI7 906 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 ADAM22Q9P0K1 906 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 CNOT8Q9UFF9 292 aaKnown RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 ZNF214Q9UL59 606 aaPredicted RBP5.98□□□□□ -1.45
RFFL-202ENST00000394597 TMCO1Q9UM00 188 aa5.98□□□□□ -1.45
RFFL-202ENST00000394597 WNK3Q9BYP7 1800 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 BCORQ6W2J9 1755 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 COL5A3P25940 1745 aaPredicted RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 ARHGEF37A1IGU5 675 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 GTPBP10A4D1E9 387 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 ABLIM1O14639 778 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 LSM1O15116 133 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 KDM1AO60341 852 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 IL18RAPO95256 599 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 KRT16P08779 473 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 INSRRP14616 1297 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 PRLRP16471 622 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 GNA15P30679 374 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 CLCN3P51790 818 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 NLRP11P59045 1033 aaKnown RBP5.97□□□□□ -1.45
RFFL-202ENST00000394597 CDK17Q00537 523 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 BTKQ06187 659 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 ZNF844Q08AG5 666 aa5.97□□□□□ -1.45
RFFL-202ENST00000394597 CBX3Q13185 183 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms