RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 FAM213AQ9BRX8 229 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 PCSK1NQ9UHG2 260 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 RASA2Q15283 850 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 GRAMD1BQ3KR37 738 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 TCHHL1Q5QJ38 904 aaPredicted RBP15.3■□□□□ 0.04
SFXN3-202ENST00000393459 C1orf220Q5T0J3 134 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 RIPOR1Q6ZS17 1223 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 FAM136AQ96C01 138 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 PAFAH2Q99487 392 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 IQCGQ9H095 443 aaKnown RBP15.3■□□□□ 0.04
SFXN3-202ENST00000393459 TCEAL9Q9UHQ7 104 aa15.3■□□□□ 0.04
SFXN3-202ENST00000393459 BRWD3Q6RI45 1802 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 GTPBP10A4D1E9 387 aaKnown RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 GH2P01242 217 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 TMED1Q13445 227 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 PTK6Q13882 451 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 SNRNP35Q16560 246 aaKnown RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 FNBP1LQ5T0N5 605 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 CYP4A22Q5TCH4 519 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 HAUS6Q7Z4H7 955 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 RASSF3Q86WH2 238 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 RBM15BQ8NDT2 890 aaKnown RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 IKBKGQ9Y6K9 419 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 TRPA1O75762 1119 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 NPTXRO95502 500 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 NDUFB10O96000 172 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 HOXA10P31260 410 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 ACOT2P49753 483 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 MFAP3P55082 362 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 JAG1P78504 1218 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 ZNF772Q68DY9 489 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 IRGCQ6NXR0 463 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 CERS5Q8N5B7 392 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 RNF148Q8N7C7 305 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 FBXO36Q8NEA4 188 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 CEP70Q8NHQ1 597 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 GRAMD1AQ96CP6 724 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 ZNF668Q96K58 619 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 MAGED2Q9UNF1 606 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 AGTPBP1Q9UPW5 1226 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 ASB3Q9Y575 518 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 HEMK1Q9Y5R4 338 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-202ENST00000393459 IVNS1ABPQ9Y6Y0 642 aa15.29■□□□□ 0.04
SFXN3-202ENST00000393459 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
SFXN3-202ENST00000393459 HLA-DOAP06340 250 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 DSG3P32926 999 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 USP46P62068 366 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 TMPRSS15P98073 1019 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 POLNQ7Z5Q5 900 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 NT5C1BQ96P26 610 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 HSD17B14Q9BPX1 270 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 OLFML3Q9NRN5 406 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 MT-ND3P03897 115 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 CYP1B1Q16678 543 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 RALGPS1Q5JS13 557 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 PRPF39Q86UA1 669 aaKnown RBP15.28■□□□□ 0.04
SFXN3-202ENST00000393459 NLRX1Q86UT6 975 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 TMEM130Q8N3G9 435 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 PPM1NQ8N819 430 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 GRK7Q8WTQ7 553 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 GALNT8Q9NY28 637 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-202ENST00000393459 PIK3CDO00329 1044 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 MAGEB3O15480 346 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 GLRA2P23416 452 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 NT5C2P49902 561 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 INHBCP55103 352 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 ORC2Q13416 577 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-202ENST00000393459 NCOA4Q13772 614 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 INPP5DQ92835 1189 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 DDX27Q96GQ7 796 aaKnown RBP15.28■□□□□ 0.04
SFXN3-202ENST00000393459 EBF4Q9BQW3 602 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 WDR11Q9BZH6 1224 aa15.28■□□□□ 0.04
SFXN3-202ENST00000393459 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.04
SFXN3-202ENST00000393459 PLSCR1O15162 318 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 ATP5HO75947 161 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 MYCLP12524 364 aaPredicted RBP15.27■□□□□ 0.04
SFXN3-202ENST00000393459 GAP43P17677 238 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 GPX6P59796 221 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 TMEM62Q0P6H9 643 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 CTC1Q2NKJ3 1217 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 WASHC2DQ5SRD0 308 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 ACAD10Q6JQN1 1059 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 CDC42EP5Q6NZY7 148 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 SCARA5Q6ZMJ2 495 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 CDHR3Q6ZTQ4 885 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 TRIM74Q86UV6 250 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 TRIM73Q86UV7 250 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 DENND1AQ8TEH3 1009 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 MCEEQ96PE7 176 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 APOL6Q9BWW8 343 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 SYNCQ9H7C4 482 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 NDE1Q9NXR1 346 aa15.27■□□□□ 0.04
SFXN3-202ENST00000393459 SNHG28P0DPA3 235 aa15.27■□□□□ 0.03
SFXN3-202ENST00000393459 FAAP100Q0VG06 881 aa15.27■□□□□ 0.03
SFXN3-202ENST00000393459 HIF1AQ16665 826 aa15.27■□□□□ 0.03
SFXN3-202ENST00000393459 MTHFD1LQ6UB35 978 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms