RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 PGLYRP2Q96PD5 576 aa13.34□□□□□ -0.27
CTSC-202ENST00000393301 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
CTSC-202ENST00000393301 PCDHA7Q9UN72 937 aa13.34□□□□□ -0.27
CTSC-202ENST00000393301 PIAS3Q9Y6X2 628 aa13.34□□□□□ -0.27
CTSC-202ENST00000393301 PTPRDP23468 1912 aa13.34□□□□□ -0.27
CTSC-202ENST00000393301 ZNF638Q14966 1978 aaKnown RBP13.34□□□□□ -0.27
CTSC-202ENST00000393301 GREB1Q4ZG55 1949 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 MYMKA6NI61 221 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 TISP43B9A030 160 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 MYL1P05976 194 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 GJA1P17302 382 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 ATF6P18850 670 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 GARTP22102 1010 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 CDC25CP30307 473 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 HOXA6P31267 233 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 PNPLA4P41247 253 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 ACOT2P49753 483 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 CCR3P51677 355 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 NRLP54845 237 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 CSTF1Q05048 431 aaKnown RBP13.33□□□□□ -0.28
CTSC-202ENST00000393301 DHX8Q14562 1220 aaKnown RBP13.33□□□□□ -0.28
CTSC-202ENST00000393301 E2F4Q16254 413 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 ARHGAP29Q52LW3 1261 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 TTC9BQ8N6N2 239 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 FAM3CQ92520 227 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 SPATA32Q96LK8 384 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 ZNF560Q96MR9 790 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 TMEM209Q96SK2 561 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 LRRC27Q9C0I9 530 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 DPP3Q9NY33 737 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 HPSEQ9Y251 543 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 ANAPC1Q9H1A4 1944 aa13.33□□□□□ -0.28
CTSC-202ENST00000393301 LDHAP00338 332 aaKnown RBP13.32□□□□□ -0.28
CTSC-202ENST00000393301 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
CTSC-202ENST00000393301 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 SV2CQ496J9 727 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 SHC4Q6S5L8 630 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 RALGPS2Q86X27 583 aaPredicted RBP13.32□□□□□ -0.28
CTSC-202ENST00000393301 ARID3BQ8IVW6 561 aaPredicted RBP13.32□□□□□ -0.28
CTSC-202ENST00000393301 ELOA2Q8IYF1 753 aaPredicted RBP13.32□□□□□ -0.28
CTSC-202ENST00000393301 SPEM1Q8N4L4 309 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 LRRC52Q8N7C0 313 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 ATRIPQ8WXE1 791 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 RMDN1Q96DB5 314 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 LRRC3BQ96PB8 259 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 TASP1Q9H6P5 420 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 ABCB6Q9NP58 842 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 KBTBD4Q9NVX7 518 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 EXOC7Q9UPT5 735 aa13.32□□□□□ -0.28
CTSC-202ENST00000393301 EPG5Q9HCE0 2579 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 KPNA7A9QM74 516 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 CYB561D2O14569 222 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
CTSC-202ENST00000393301 TGM1P22735 817 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTSC-202ENST00000393301 GABRR2P28476 465 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 CTHP32929 405 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 ME1P48163 572 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 LRRC32Q14392 662 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 GAS6Q14393 721 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 PUM1Q14671 1186 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTSC-202ENST00000393301 PPP2R5DQ14738 602 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 VEPH1Q14D04 833 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 SLC39A12Q504Y0 691 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 ARHGAP15Q53QZ3 475 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 WDR44Q5JSH3 913 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 DGKKQ5KSL6 1271 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 RRAGBQ5VZM2 374 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 SV2BQ7L1I2 683 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 LRRTM3Q86VH5 581 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 METTL23Q86XA0 190 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 THEM5Q8N1Q8 247 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 SYNPOQ8N3V7 929 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 C1orf127Q8N9H9 656 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 IQUBQ8NA54 791 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 POMGNT1Q8WZA1 660 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 CLIC6Q96NY7 704 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 ACCSQ96QU6 501 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 PKMYT1Q99640 499 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 TNMDQ9H2S6 317 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 ZHX3Q9H4I2 956 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 SLITRK6Q9H5Y7 841 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 GDAP2Q9NXN4 497 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 SMG5Q9UPR3 1016 aaKnown RBP13.31□□□□□ -0.28
CTSC-202ENST00000393301 SLC27A5Q9Y2P5 690 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 PCDHB13Q9Y5F0 798 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 CNOT1A5YKK6 2376 aaKnown RBP13.31□□□□□ -0.28
CTSC-202ENST00000393301 ACACBO00763 2458 aa13.31□□□□□ -0.28
CTSC-202ENST00000393301 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
CTSC-202ENST00000393301 HMGA1P17096 107 aaKnown RBP13.3□□□□□ -0.28
CTSC-202ENST00000393301 WNT7BP56706 349 aa13.3□□□□□ -0.28
CTSC-202ENST00000393301 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
CTSC-202ENST00000393301 KCNA1Q09470 495 aa13.3□□□□□ -0.28
CTSC-202ENST00000393301 CCINQ13939 588 aa13.3□□□□□ -0.28
CTSC-202ENST00000393301 ZNF268Q14587 947 aaPredicted RBP13.3□□□□□ -0.28
CTSC-202ENST00000393301 NFE2Q16621 373 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms