RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 TNPO2O14787 897 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PJA2O43164 708 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 CRYZL1O95825 349 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 CALML3P27482 149 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MAPK11Q15759 364 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MAPKAPK5Q8IW41 473 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PLEKHA8Q96JA3 519 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PURBQ96QR8 312 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 OLFM1Q99784 485 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 CCDC177Q9NQR7 707 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 NRXN3Q9Y4C0 1643 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 BTBD19C9JJ37 291 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 H7C0C1 242 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 K7EPI3 171 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 TNFRSF10AO00220 468 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 FCHO1O14526 889 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PRPF3O43395 683 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PABPC1P11940 636 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MZF1P28698 734 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MAP3K10Q02779 954 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 FAM47AQ5JRC9 791 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PALM2Q8IXS6 379 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PPP4R1Q8TF05 950 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 NCSTNQ92542 709 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 CELF1Q92879 486 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MCRS1Q96EZ8 462 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 RMND5BQ96G75 393 aaPredicted RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 KCNK16Q96T55 309 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MTFR1LQ9H019 292 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 RNPEPQ9H4A4 650 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 RETREG1Q9H6L5 497 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 EHMT1Q9H9B1 1298 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 LIN28AQ9H9Z2 209 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MOV10Q9HCE1 1003 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF304Q9HCX3 659 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 INIPQ9NRY2 104 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 MKS1Q9NXB0 559 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 APOBEC2Q9Y235 224 aaKnown RBP7.98□□□□□ -1.13
VTI1A-201ENST00000393077 OVOS2A0A0G2JMS6 1433 aa7.98□□□□□ -1.13
VTI1A-201ENST00000393077 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ALOX5P09917 674 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ATF4P18848 351 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TAC1P20366 129 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MAN1A1P33908 653 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 EIF6P56537 245 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GTF2IP78347 998 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 STX3Q13277 289 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ATG16L1Q676U5 607 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TTC33Q6PID6 262 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF786Q8N393 782 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 SCFD1Q8WVM8 642 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 NACC2Q96BF6 587 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MANSC1Q9H8J5 431 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 SAYSD1Q9NPB0 183 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ARL8BQ9NVJ2 186 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 SYBUQ9NX95 663 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TBC1D14Q9P2M4 693 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MYRFQ9Y2G1 1151 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 A0A087X0T9 212 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 C2CD2LO14523 706 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 RPS6KA4O75676 772 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 FAM228BP0C875 321 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MYL2P10916 166 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GYS1P13807 737 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 IFNAR1P17181 557 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 AMPD1P23109 780 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ADD2P35612 726 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 KRT20P35900 424 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TXKP42681 527 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 STT3AP46977 705 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 RFX5P48382 616 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 AQP4P55087 323 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GIT2Q14161 759 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 UBE3CQ15386 1083 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 LGSNQ5TDP6 509 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ANKRD40Q6AI12 368 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 NEK5Q6P3R8 708 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 HEATR3Q7Z4Q2 680 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 AKAP14Q86UN6 197 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GRAMD2AQ8IUY3 354 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ELMOD2Q8IZ81 293 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ZCCHC7Q8N3Z6 543 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ACMSDQ8TDX5 336 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 GIPC2Q8TF65 315 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TGFBRAP1Q8WUH2 860 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 SLC10A4Q96EP9 437 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MAELQ96JY0 434 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 TMEM120AQ9BXJ8 343 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 MRPL9Q9BYD2 267 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 PLEKHA5Q9HAU0 1116 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 WDR6Q9NNW5 1121 aaKnown RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 NAALADL1Q9UQQ1 740 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 ZNF804BA4D1E1 1349 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 COL15A1P39059 1388 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 CAPN8A6NHC0 703 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 DNALI1O14645 258 aaPredicted RBP7.97□□□□□ -1.13
VTI1A-201ENST00000393077 SERPINB2P05120 415 aa7.97□□□□□ -1.13
VTI1A-201ENST00000393077 POLR2MP0CAP2 368 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms