RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 SYNCQ9H7C4 482 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
LTN1-203ENST00000389195 UNCXA6NJT0 531 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 MICAL2O94851 1124 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 ASGR1P07306 291 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 FGFR1P11362 822 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
LTN1-203ENST00000389195 CCDC130P13994 396 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 PLTPP55058 493 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 TNNC1P63316 161 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 KCNA10Q16322 511 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 HP1BP3Q5SSJ5 553 aaPredicted RBP10.77□□□□□ -0.69
LTN1-203ENST00000389195 EXOC8Q8IYI6 725 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 ARFGAP1Q8N6T3 406 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 UBL4BQ8N7F7 174 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 OR6B3Q8NGW1 331 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 RAPGEF5Q92565 580 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 ARL8AQ96BM9 186 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 GDF3Q9NR23 364 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 PCDHA3Q9Y5H8 950 aa10.77□□□□□ -0.69
LTN1-203ENST00000389195 PDE4DIPQ5VU43 2346 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 SMIM28A0A1B0GU29 152 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 MBLAC1A4D2B0 266 aaPredicted RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 TMEM88BA6NKF7 163 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CHRNA1P02708 482 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 ETS1P14921 441 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 TFE3P19532 575 aaPredicted RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 ADORA2BP29275 332 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 ABCD1P33897 745 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CPT1AP50416 773 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 BPIFB4P59827 614 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 DR1Q01658 176 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 PTPN11Q06124 597 aaPredicted RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 C15orf59Q2T9L4 293 aaPredicted RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 SLC27A1Q6PCB7 646 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CCDC137Q6PK04 289 aaKnown RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 FAM228AQ86W67 206 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CCDC105Q8IYK2 499 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 GLIS1Q8NBF1 620 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 NFKBIZQ9BYH8 718 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 MIOSQ9NXC5 875 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CNTN6Q9UQ52 1028 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 IPPQ9Y573 584 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CDY2AQ9Y6F7 541 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CLDN5O00501 218 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CA12O43570 354 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CILPO75339 1184 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 ZSCAN5DPP0CG00 497 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 GHRP10912 638 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 AKR1A1P14550 325 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 IL1R2P27930 398 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CTNNA1P35221 906 aaKnown RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 THPOP40225 353 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 ATXN1P54253 815 aaKnown RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 ATP11AP98196 1134 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 POU5F1Q01860 360 aaKnown RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 UBXN11Q5T124 520 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 C11orf63Q6NUN7 778 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 SLC13A5Q86YT5 568 aaPredicted RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 IFT20Q8IY31 132 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
LTN1-203ENST00000389195 CD99L2Q8TCZ2 262 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 TMEM176AQ96HP8 235 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 GAD1Q99259 594 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 CARD9Q9H257 536 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 TSPAN16Q9UKR8 245 aa10.76□□□□□ -0.69
LTN1-203ENST00000389195 SMIM23A6NLE4 172 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 FOXO6A8MYZ6 492 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 E5RJQ4 531 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 MLH1P40692 756 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 YARSP54577 528 aaKnown RBP10.75□□□□□ -0.69
LTN1-203ENST00000389195 RWDD2BP57060 319 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 SIX1Q15475 284 aaPredicted RBP10.75□□□□□ -0.69
LTN1-203ENST00000389195 SOWAHAQ2M3V2 549 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 TRNP1Q6NT89 227 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 DNAJC24Q6P3W2 148 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 NOTUMQ6P988 496 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 FEZF2Q8TBJ5 459 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
LTN1-203ENST00000389195 ZIM3Q96PE6 472 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 UVRAGQ9P2Y5 699 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 ST3GAL5Q9UNP4 418 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 TRPM7Q96QT4 1865 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 CASTOR2A6NHX0 329 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 RRN3P2A6NIE6 340 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 HAS3O00219 553 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 GABBR2O75899 941 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 IL18RAPO95256 599 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 SEL1L2Q5TEA6 688 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 MFSD7Q6UXD7 560 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 CCDC25Q86WR0 208 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 TMEM35BQ8NCS4 154 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 FBXO25Q8TCJ0 367 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 BCO2Q9BYV7 579 aa10.75□□□□□ -0.69
LTN1-203ENST00000389195 XPNPEP3Q9NQH7 507 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms