RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TRIM54Q9BYV2 358 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 C1orf112Q9NSG2 853 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 KLC4Q9NSK0 619 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 SEMA4GQ9NTN9 838 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 L1RE1Q9UN81 338 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 PLEKHM1Q9Y4G2 1056 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 PCDHA1Q9Y5I3 950 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 COX11Q9Y6N1 276 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 CKAP5Q14008 2032 aa2.96□□□□□ -1.94
RNU6-541P-201ENST00000384709 CCDC151A5D8V7 595 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZAR1LA6NP61 321 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 H3BUI4 141 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 MYO1FO00160 1098 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 DCLK1O15075 740 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 PROP1O75360 226 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 C1QL1O75973 258 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 KIF20AO95235 890 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 GNAI2P04899 355 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 CT47B1P0C2W7 299 aaPredicted RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 NPR1P16066 1061 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 PPP3CBP16298 524 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 EN2P19622 333 aaPredicted RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 NDUFV1P49821 464 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 CACNA2D1P54289 1103 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 SOX10P56693 466 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 EXOSC9Q06265 439 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 LRRC41Q15345 812 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 TXNRD1Q16881 649 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 CD300EQ496F6 205 aaPredicted RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 SFRP4Q6FHJ7 346 aaPredicted RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 NPNTQ6UXI9 565 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 MAEAQ7L5Y9 396 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 DTX2Q86UW9 622 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 PSD4Q8NDX1 1056 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 NSUN7Q8NE18 718 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 SLC30A5Q8TAD4 765 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 PPP1R35Q8TAP8 253 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 CAGE1Q8TC20 777 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 LPIN2Q92539 896 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 TNPO1Q92973 898 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 MTFMTQ96DP5 389 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 BBC3Q96PG8 261 aaPredicted RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 MESP1Q9BRJ9 268 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 SMURF2Q9HAU4 748 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 METTL14Q9HCE5 456 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 SARS2Q9NP81 518 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 CASS4Q9NQ75 786 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 PIH1D1Q9NWS0 290 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 TESQ9UGI8 421 aaKnown RBP2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 PAXBP1Q9Y5B6 917 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 ENTPD2Q9Y5L3 495 aa2.95□□□□□ -1.94
RNU6-541P-201ENST00000384709 ADGRA2Q96PE1 1338 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 A0A087WWL8 130 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 A0A0B4J269 797 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 VWC2LB2RUY7 222 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 FAM227AF5H4B4 570 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 MGST3O14880 152 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 YY2O15391 372 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 PHGDHO43175 533 aaKnown RBP2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 TRIAP1O43715 76 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 PEX1O43933 1283 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 CTNND1O60716 968 aaKnown RBP2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 ATXN1LP0C7T5 689 aaKnown RBP2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 ELFN1P0C7U0 828 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 CYP2C9P11712 490 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 ITPKBP27987 946 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 PCSK6P29122 969 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 GRIA3P42263 894 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 GCLCP48506 637 aaPredicted RBP2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 LOXL3P58215 753 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 NANOS3P60323 173 aaKnown RBP2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 MRPS35P82673 323 aaKnown RBP2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 FSTL1Q12841 308 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 TUBB3Q13509 450 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 MLC1Q15049 377 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 PPP2R5AQ15172 486 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 ERCC6LQ2NKX8 1250 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 KHDC1LQ5JSQ8 128 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 SWSAP1Q6NVH7 229 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 SRGAP1Q7Z6B7 1085 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZNF575Q86XF7 245 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 GAS2L3Q86XJ1 694 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 SLC44A3Q8N4M1 653 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 ZBTB34Q8NCN2 500 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 FAM46DQ8NEK8 389 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 MYCBPAPQ8TBZ2 947 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 NTN5Q8WTR8 489 aaPredicted RBP2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 JDP2Q8WYK2 163 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 RFKQ969G6 155 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 TMEM125Q96AQ2 219 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 PBKQ96KB5 322 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 ALG8Q9BVK2 526 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 C22orf23Q9BZE7 217 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 SLC17A6Q9P2U8 582 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 PCDHA6Q9UN73 950 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 SH2B3Q9UQQ2 575 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 INSL6Q9Y581 213 aa2.94□□□□□ -1.94
RNU6-541P-201ENST00000384709 A6NNZ2 444 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 ADM5C9JUS6 153 aa2.93□□□□□ -1.94
RNU6-541P-201ENST00000384709 M0QYG6 137 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms