RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 STYXL1Q9Y6J8 313 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 USH1CQ9Y6N9 552 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 K7ERI5 159 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 FSCN2O14926 492 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 TP73O15350 636 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 THAP12O43422 761 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 GAS2O43903 313 aaKnown RBP9.45□□□□□ -0.9
GPNMB-202ENST00000381990 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ATP6V1C1P21283 382 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 KRT17Q04695 432 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 PTK6Q13882 451 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 TTLL4Q14679 1199 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 MESDQ14696 234 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 LBRQ14739 615 aaKnown RBP9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ARHGAP44Q17R89 818 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 WASHC2DQ5SRD0 308 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 KRT39Q6A163 491 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.45□□□□□ -0.9
GPNMB-202ENST00000381990 EXOC8Q8IYI6 725 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 BRI3BPQ8WY22 251 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 CCDC127Q96BQ5 260 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 SPATA33Q96N06 139 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 LRRC37BQ96QE4 947 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 UBE2TQ9NPD8 197 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-202ENST00000381990 MORF4L1Q9UBU8 362 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 PLXNA1Q9UIW2 1896 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 FAM47DPA6NHR8 397 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 TRAFD1O14545 582 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-202ENST00000381990 EXTL3O43909 919 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ACADSP16219 412 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 TAC1P20366 129 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 PEX19P40855 299 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ABL2P42684 1182 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 SLC26A2P50443 739 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 MGAT5Q09328 741 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 TSNAXIP1Q2TAA8 658 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF792Q3KQV3 632 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 SGO2Q562F6 1265 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 SLFN12LQ6IEE8 588 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 CGB2Q6NT52 195 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ARMCX2Q7L311 632 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 APBB1IPQ7Z5R6 666 aaPredicted RBP9.45□□□□□ -0.9
GPNMB-202ENST00000381990 VSIG1Q86XK7 387 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ABRAQ8N0Z2 381 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 GDAP1Q8TB36 358 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 FOXP3Q9BZS1 431 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 TMEM134Q9H6X4 195 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 ASIC3Q9UHC3 531 aa9.45□□□□□ -0.9
GPNMB-202ENST00000381990 PLXNB2O15031 1838 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 LRRD1A4D1F6 860 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 KLHL33A6NCF5 533 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 STRNO43815 780 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 LRRN2O75325 713 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 NPTXRO95502 500 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 GH1P01241 217 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 CYP1A2P05177 515 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 ABHD2P08910 425 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 CREB1P16220 341 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 GPC3P51654 580 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 IER5Q5VY09 327 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 ARHGEF19Q8IW93 802 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 C2orf69Q8N8R5 385 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF564Q8TBZ8 553 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-202ENST00000381990 UTP4Q969X6 686 aaKnown RBP9.44□□□□□ -0.9
GPNMB-202ENST00000381990 FAM213AQ9BRX8 229 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 SMARCAD1Q9H4L7 1026 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 SENP1Q9P0U3 644 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 GTF3C4Q9UKN8 822 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 ANKRD33BA6NCL7 494 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 ADCY3O60266 1144 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 LINGO3P0C6S8 592 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 TPBGLP0DKB5 382 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 PECAM1P16284 738 aaPredicted RBP9.44□□□□□ -0.9
GPNMB-202ENST00000381990 ADORA2AP29274 412 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 EFNA5P52803 228 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 CAPSQ13938 189 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 MPP2Q14168 576 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 SLC30A9Q6PML9 568 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 RPUSD2Q8IZ73 545 aaKnown RBP9.44□□□□□ -0.9
GPNMB-202ENST00000381990 ANKLE1Q8NAG6 615 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 FBXL13Q8NEE6 735 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 SLC20A1Q8WUM9 679 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 PDGFCQ9NRA1 345 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 AGO2Q9UKV8 859 aaKnown RBP9.44□□□□□ -0.9
GPNMB-202ENST00000381990 TRIM33Q9UPN9 1127 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 IVNS1ABPQ9Y6Y0 642 aa9.44□□□□□ -0.9
GPNMB-202ENST00000381990 TCRBV7S2A1N4TA0A589 114 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 PEX11AO75192 247 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 ATF2P15336 505 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 MARK3P27448 753 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 KCNJ1P48048 391 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 CTCFP49711 727 aaPredicted RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 PSMD6Q15008 389 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 SPRYD7Q5W111 196 aa9.43□□□□□ -0.9
GPNMB-202ENST00000381990 ZNF467Q7Z7K2 595 aaPredicted RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 PRPF31Q8WWY3 499 aaKnown RBP9.43□□□□□ -0.9
GPNMB-202ENST00000381990 PSPC1Q8WXF1 523 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms