RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLCN4-201ENST00000380829 ZNF157P51786 506 aaPredicted RBP15.11■□□□□ 0.01
CLCN4-201ENST00000380829 CDH8P55286 799 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 DR1Q01658 176 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 SF3A3Q12874 501 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLCN4-201ENST00000380829 PTP4A2Q12974 167 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 ORC1Q13415 861 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 MAMLD1Q13495 774 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 ZKSCAN8Q15776 578 aaPredicted RBP15.11■□□□□ 0.01
CLCN4-201ENST00000380829 PHF13Q86YI8 300 aaPredicted RBP15.11■□□□□ 0.01
CLCN4-201ENST00000380829 PRELID2Q8N945 189 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 TFAP2BQ92481 460 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 BAIAP2L1Q9UHR4 511 aa15.11■□□□□ 0.01
CLCN4-201ENST00000380829 UTP11Q9Y3A2 253 aaKnown RBP15.11■□□□□ 0.01
CLCN4-201ENST00000380829 BHMG1C9JSJ3 638 aaPredicted RBP15.1■□□□□ 0.01
CLCN4-201ENST00000380829 CUL1Q13616 776 aa15.1■□□□□ 0.01
CLCN4-201ENST00000380829 BYSLQ13895 437 aaKnown RBP15.1■□□□□ 0.01
CLCN4-201ENST00000380829 TAF1CQ15572 869 aaPredicted RBP15.1■□□□□ 0.01
CLCN4-201ENST00000380829 SLC10A6Q3KNW5 377 aa15.1■□□□□ 0.01
CLCN4-201ENST00000380829 MORN1Q5T089 497 aa15.1■□□□□ 0.01
CLCN4-201ENST00000380829 CCDC50Q8IVM0 306 aa15.1■□□□□ 0.01
CLCN4-201ENST00000380829 NSMCE1Q8WV22 266 aa15.1■□□□□ 0.01
CLCN4-201ENST00000380829 SLC5A4Q9NY91 659 aa15.1■□□□□ 0.01
CLCN4-201ENST00000380829 KLHL33A6NCF5 533 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 ENO4A6NNW6 628 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 O00370 1275 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 ATP6V1G2O95670 118 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 SLC8A1P32418 973 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 MAP2K5Q13163 448 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 CCL14Q16627 93 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 NBPF20Q3BBV1 942 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 ZNF667Q5HYK9 610 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 OLFML2BQ68BL8 750 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 SLC13A5Q86YT5 568 aaPredicted RBP15.09■□□□□ 0.01
CLCN4-201ENST00000380829 RASAL3Q86YV0 1011 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 OR2W6PQ8NHA6 318 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 WHAMMQ8TF30 809 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 MAGOHBQ96A72 148 aaKnown RBP15.09■□□□□ 0.01
CLCN4-201ENST00000380829 RSRC1Q96IZ7 334 aaKnown RBP15.09■□□□□ 0.01
CLCN4-201ENST00000380829 NOD2Q9HC29 1040 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 KAT6AQ92794 2004 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 PHF2O75151 1096 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
CLCN4-201ENST00000380829 CLUL1Q15846 466 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 TTC27Q6P3X3 843 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 ARMC2Q8NEN0 867 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 MAGEC3Q8TD91 643 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 SMYD3Q9H7B4 428 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 GGA2Q9UJY4 613 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 PLAAQ9Y263 795 aa15.09■□□□□ 0.01
CLCN4-201ENST00000380829 TLR3O15455 904 aaKnown RBP15.08■□□□□ 0.01
CLCN4-201ENST00000380829 AP1G2O75843 785 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 ITGBL1O95965 494 aaPredicted RBP15.08■□□□□ 0.01
CLCN4-201ENST00000380829 SMIM10L2AP0DMW4 78 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 SMIM10L2BP0DMW5 78 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 CD19P15391 556 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 MMP8P22894 467 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 FLT3P36888 993 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 RPL7AP62424 266 aaKnown RBP15.08■□□□□ 0.01
CLCN4-201ENST00000380829 LACTBP83111 547 aaPredicted RBP15.08■□□□□ 0.01
CLCN4-201ENST00000380829 PLEKHA7Q6IQ23 1121 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 TLK2Q86UE8 772 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 SEC16BQ96JE7 1060 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 VCPIP1Q96JH7 1222 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 SDCBP2Q9H190 292 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 MRPL47Q9HD33 250 aaKnown RBP15.08■□□□□ 0.01
CLCN4-201ENST00000380829 GNEQ9Y223 722 aaKnown RBP15.08■□□□□ 0.01
CLCN4-201ENST00000380829 USTQ9Y2C2 406 aa15.08■□□□□ 0.01
CLCN4-201ENST00000380829 DNAH12Q6ZR08 3092 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 GMNCA6NCL1 334 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 MGRN1O60291 552 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 PROSCO94903 275 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 RARAP10276 462 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 CYP2B6P20813 491 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 POLR2BP30876 1174 aaKnown RBP15.08■□□□□ 0
CLCN4-201ENST00000380829 GJC1P36383 396 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 ELF3P78545 371 aaPredicted RBP15.08■□□□□ 0
CLCN4-201ENST00000380829 JAMLQ86YT9 394 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 CXorf38Q8TB03 319 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 SEC14L1Q92503 715 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 CDHR5Q9HBB8 845 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 SPATS2LQ9NUQ6 558 aaKnown RBP15.08■□□□□ 0
CLCN4-201ENST00000380829 HMGXB4Q9UGU5 601 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 L3MBTL1Q9Y468 752 aa15.08■□□□□ 0
CLCN4-201ENST00000380829 A6NJR5 290 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 HSPA6P17066 643 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 SLC1A1P43005 524 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 SSR1P43307 286 aaKnown RBP15.07■□□□□ 0
CLCN4-201ENST00000380829 TAS2R40P59535 323 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 XRCC4Q13426 336 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 TMEM132DQ14C87 1099 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 SIX1Q15475 284 aaPredicted RBP15.07■□□□□ 0
CLCN4-201ENST00000380829 PPP2R5EQ16537 467 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 CYP4A22Q5TCH4 519 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 AP1ARQ63HQ0 302 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 HIBCHQ6NVY1 386 aaPredicted RBP15.07■□□□□ 0
CLCN4-201ENST00000380829 CCDC137Q6PK04 289 aaKnown RBP15.07■□□□□ 0
CLCN4-201ENST00000380829 WDTC1Q8N5D0 677 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 TMEM35BQ8NCS4 154 aa15.07■□□□□ 0
CLCN4-201ENST00000380829 ACAP3Q96P50 834 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms