RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ARL8BQ9NVJ2 186 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 SERPINB13Q9UIV8 391 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 KCNJ14Q9UNX9 436 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PCDHGA3Q9Y5H0 932 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 CEPT1Q9Y6K0 416 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PFASO15067 1338 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 CDK2AP1O14519 115 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PFDN6O15212 129 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 GTPBP6O43824 516 aaPredicted RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 GUCY1B2O75343 617 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 BAG2O95816 211 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 APBA3O96018 575 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 RPN1P04843 607 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ENO2P09104 434 aaPredicted RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 BRAFP15056 766 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PPARGP37231 505 aaPredicted RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 DNAJC3Q13217 504 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PCSK7Q16549 785 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ANKRD20A4Q4UJ75 823 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TTI2Q6NXR4 508 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 USP43Q70EL4 1123 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 MTDHQ86UE4 582 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ZSCAN29Q8IWY8 852 aaPredicted RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 RNF169Q8NCN4 708 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 BAP1Q92560 729 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TMEM47Q9BQJ4 181 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PACSIN1Q9BY11 444 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 MRPL1Q9BYD6 325 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TMEM60Q9H2L4 133 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 RRN3Q9NYV6 651 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 HERC5Q9UII4 1024 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 LZTS1Q9Y250 596 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 NR2E1Q9Y466 385 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 SSU72P8A0A1W2PR75 194 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 F8W8V4 182 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PLA2G6O60733 806 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ZBED4O75132 1171 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 STAMBPO95630 424 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ATP6V1B1P15313 513 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ZNF12P17014 697 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 SUZ12Q15022 739 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 NPY5RQ15761 445 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 LRRC36Q1X8D7 754 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TMEM266Q2M3C6 531 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 SLC45A4Q5BKX6 768 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PDXDC2PQ6P474 469 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 CCDC81Q6ZN84 652 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 VPS52Q8N1B4 723 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TTC30BQ8N4P2 665 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 CNOT6LQ96LI5 555 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 NOC4LQ9BVI4 516 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 IL17RBQ9NRM6 502 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TBC1D23Q9NUY8 699 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 DNAJC17Q9NVM6 304 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 MTMR4Q9NYA4 1195 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TAS2R1Q9NYW7 299 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PI4KBQ9UBF8 816 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 DNAJB4Q9UDY4 337 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 SIK3Q9Y2K2 1263 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PARNO95453 639 aaKnown RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 USP17L8P0C7I0 530 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 DDX5P17844 614 aaKnown RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 PON1P27169 355 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 PCYT1AP49585 367 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 STRN3Q13033 797 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 EFTUD2Q15029 972 aaKnown RBP eCLIP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 MMEL1Q495T6 779 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 ARHGEF18Q6ZSZ5 1173 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 RHOT2Q8IXI1 618 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 RASGEF1CQ8N431 466 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 GMCL1P1Q8NEA9 526 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 SHISA4Q96DD7 197 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 ZFRQ96KR1 1074 aaKnown RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 BIRC8Q96P09 236 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 UIMC1Q96RL1 719 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 KANSL2Q9H9L4 492 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 CABP5Q9NP86 173 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 SNX24Q9Y343 169 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 RABGAP1Q9Y3P9 1069 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 USP17L3A6NCW0 530 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 USP17L4A6NCW7 530 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 MAGEB2O15479 319 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 ATMINO43313 823 aaPredicted RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 ZWINTO95229 277 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 GLULP15104 373 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 AP2B1P63010 937 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 PDAP1Q13442 181 aaKnown RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 NCOA4Q13772 614 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 TNIP1Q15025 636 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 TDRD12Q587J7 1177 aaKnown RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 USP17L1Q7RTZ2 530 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 NLRX1Q86UT6 975 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 AMIGO3Q86WK7 504 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 LRRC6Q86X45 466 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 DCLK2Q8N568 766 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 CPSF7Q8N684 471 aaKnown RBP7.85□□□□□ -1.15
CDKL5-201ENST00000379989 SUN5Q8TC36 379 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 MED30Q96HR3 178 aa7.85□□□□□ -1.15
CDKL5-201ENST00000379989 MRPS26Q9BYN8 205 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms