RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 WDR64B1ANS9 1081 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 TJP3O95049 919 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 ZNF394Q53GI3 561 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 SPOCD1Q6ZMY3 1216 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 CENPUQ71F23 418 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 USP37Q86T82 979 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 SEPT12Q8IYM1 358 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 RCOR2Q8IZ40 523 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 ENDOVQ8N8Q3 282 aaKnown RBP18.96■□□□□ 0.63
GNE-201ENST00000377902 RBBP8NLQ8NC74 664 aaPredicted RBP18.96■□□□□ 0.63
GNE-201ENST00000377902 NUB1Q9Y5A7 615 aa18.96■□□□□ 0.63
GNE-201ENST00000377902 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 LRRD1A4D1F6 860 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 ATP6V1C1P21283 382 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 GEMIN4P57678 1058 aaKnown RBP18.95■□□□□ 0.62
GNE-201ENST00000377902 MORF4L2Q15014 288 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 OASLQ15646 514 aaKnown RBP18.95■□□□□ 0.62
GNE-201ENST00000377902 SMTNL2Q2TAL5 461 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 C3orf62Q6ZUJ4 267 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 GJD4Q96KN9 370 aaPredicted RBP18.95■□□□□ 0.62
GNE-201ENST00000377902 NTPCRQ9BSD7 190 aaKnown RBP18.95■□□□□ 0.62
GNE-201ENST00000377902 XPNPEP1Q9NQW7 623 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 HEY2Q9UBP5 337 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 COL11A2P13942 1736 aaPredicted RBP18.95■□□□□ 0.62
GNE-201ENST00000377902 C2CD2LO14523 706 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 MARK3P27448 753 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 ERFP50548 548 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 FKBP1AP62942 108 aaKnown RBP18.95■□□□□ 0.62
GNE-201ENST00000377902 LMNB2Q03252 620 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 SLC45A4Q5BKX6 768 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 C4orf50Q6ZRC1 276 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 RFX8Q6ZV50 586 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 UCMAQ8WVF2 138 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 TIPINQ9BVW5 301 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 ZNF341Q9BYN7 854 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 ANKEF1Q9NU02 776 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 PARVAQ9NVD7 372 aa18.95■□□□□ 0.62
GNE-201ENST00000377902 LIN7AO14910 233 aaPredicted RBP18.94■□□□□ 0.62
GNE-201ENST00000377902 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.62
GNE-201ENST00000377902 SLC18A1P54219 525 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 BPIFB4P59827 614 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 HIF1AQ16665 826 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 NIPA1Q7RTP0 329 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 PHF13Q86YI8 300 aaPredicted RBP18.94■□□□□ 0.62
GNE-201ENST00000377902 RHPN2Q8IUC4 686 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.94■□□□□ 0.62
GNE-201ENST00000377902 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
GNE-201ENST00000377902 OR5B17Q8NGF7 314 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 NRG4Q8WWG1 115 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 ZBTB10Q96DT7 871 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 RMDN3Q96TC7 470 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 PAFAH2Q99487 392 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 FOXP3Q9BZS1 431 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 TMEM191CA6NGB0 347 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 ZBED4O75132 1171 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 KRT36O76013 467 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 TMEM191BP0C7N4 346 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 CHRNA5P30532 468 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 MYH9P35579 1960 aaKnown RBP18.94■□□□□ 0.62
GNE-201ENST00000377902 LIG4P49917 911 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 RASSF2P50749 326 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 VCPP55072 806 aaKnown RBP18.94■□□□□ 0.62
GNE-201ENST00000377902 SEPT7Q16181 437 aaKnown RBP18.94■□□□□ 0.62
GNE-201ENST00000377902 KCNT1Q5JUK3 1230 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 WASHC2DQ5SRD0 308 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 SWSAP1Q6NVH7 229 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 DTX3LQ8TDB6 740 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 PYROXD1Q8WU10 500 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 DNAJC9Q8WXX5 260 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 NMRK1Q9NWW6 199 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 ZNF70Q9UC06 446 aaPredicted RBP18.94■□□□□ 0.62
GNE-201ENST00000377902 IP6K2Q9UHH9 426 aa18.94■□□□□ 0.62
GNE-201ENST00000377902 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 hCG_1818297A0A087WSY0 165 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 SPDYE2BA6NHP3 402 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 TRAFD1O14545 582 aaPredicted RBP18.93■□□□□ 0.62
GNE-201ENST00000377902 CLGNO14967 610 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 SPDYE6P0CI01 402 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 KPNB1Q14974 876 aaKnown RBP18.93■□□□□ 0.62
GNE-201ENST00000377902 EFHC2Q5JST6 749 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 CYP4A22Q5TCH4 519 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 TTC7BQ86TV6 843 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 LARGE2Q8N3Y3 721 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 SAMD3Q8N6K7 520 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 ZNF606Q8WXB4 792 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 DEFB129Q9H1M3 183 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 PIDD1Q9HB75 910 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 TMOD2Q9NZR1 351 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 SENP1Q9P0U3 644 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 ANKFY1Q9P2R3 1169 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 ZBTB12Q9Y330 459 aaPredicted RBP18.93■□□□□ 0.62
GNE-201ENST00000377902 EXTL3O43909 919 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 SERPINB3P29508 390 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 IRX1P78414 480 aaPredicted RBP18.93■□□□□ 0.62
GNE-201ENST00000377902 SATB1Q01826 763 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 MUM1Q2TAK8 710 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 FYB2Q5VWT5 728 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 RBM41Q96IZ5 413 aaKnown RBP18.93■□□□□ 0.62
GNE-201ENST00000377902 SCINQ9Y6U3 715 aa18.93■□□□□ 0.62
GNE-201ENST00000377902 HARSP12081 509 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms