RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
CBWD3-203ENST00000377344 TNIP3Q96KP6 325 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 AGPAT1Q99943 283 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 NME7Q9Y5B8 376 aa13.79□□□□□ -0.2
CBWD3-203ENST00000377344 SYN3O14994 580 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 TNFAIP3P21580 790 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 FECHP22830 423 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 PCSK1P29120 753 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 CTNNB1P35222 781 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 CDR1P51861 262 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 MTF1Q14872 753 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 KIAA1841Q6NSI8 718 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 TAS1R1Q7RTX1 841 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 GLYCTKQ8IVS8 523 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 C12orf29Q8N999 325 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 CLP1Q92989 425 aaKnown RBP13.78□□□□□ -0.2
CBWD3-203ENST00000377344 TTPALQ9BTX7 342 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 FAM49BQ9NUQ9 324 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
CBWD3-203ENST00000377344 MTUS1Q9ULD2 1270 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
CBWD3-203ENST00000377344 TNRC18O15417 2968 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-203ENST00000377344 CEP290O15078 2479 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 KIAA1671Q9BY89 1806 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 SSU72P8A0A1W2PR75 194 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 FAM170AA1A519 330 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 LINC01553A4QN01 128 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 ARHGAP6O43182 974 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 MMEP08473 750 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 FGFR3P22607 806 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 CYLC1P35663 651 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-203ENST00000377344 RGS19P49795 217 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 CDR2Q01850 454 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 KRT17Q04695 432 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 USP41Q3LFD5 358 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 SGO2Q562F6 1265 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 VARS2Q5ST30 1063 aaKnown RBP13.78□□□□□ -0.2
CBWD3-203ENST00000377344 RAD9BQ6WBX8 426 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-203ENST00000377344 ZNF606Q8WXB4 792 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 SPTLC3Q9NUV7 552 aa13.78□□□□□ -0.2
CBWD3-203ENST00000377344 C2CD2LO14523 706 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 MED7O43513 233 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 ATP2C2O75185 946 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 FGF18O76093 207 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 CA3P07451 260 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 VDRP11473 427 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 KIF11P52732 1056 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 GFPT1Q06210 699 aaPredicted RBP13.77□□□□□ -0.21
CBWD3-203ENST00000377344 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
CBWD3-203ENST00000377344 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 ZNF677Q86XU0 584 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 CCDC170Q8IYT3 715 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 B3GALNT2Q8NCR0 500 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 SPATA18Q8TC71 538 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 TFAP2BQ92481 460 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 CDH9Q9ULB4 789 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 KIAA1257Q9ULG3 409 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 TSC2P49815 1807 aa13.77□□□□□ -0.21
CBWD3-203ENST00000377344 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 OAZ2O95190 189 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 IPO7O95373 1038 aaKnown RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 LINC00271P0C7V0 271 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 PTPN1P18031 435 aaKnown RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CA8P35219 290 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 BMPR1AP36894 532 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 TSPY1Q01534 308 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 SMYD5Q6GMV2 418 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 ZNF280DQ6N043 979 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 DDX53Q86TM3 631 aaKnown RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 PASD1Q8IV76 773 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CRYBG2Q8N1P7 616 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 DDX1Q92499 740 aaKnown RBP13.76□□□□□ -0.21
CBWD3-203ENST00000377344 RTP3Q9BQQ7 232 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 ACBD6Q9BR61 282 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 C17orf80Q9BSJ5 609 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 VN1R3Q9BXE9 311 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 PCDHA11Q9Y5I1 949 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 A0A087X0T9 212 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 TMCO5BA8MYB1 307 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 NDUFA10O95299 355 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 SOD2P04179 222 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CFHP08603 1231 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 FAM228BP0C875 321 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CCDC130P13994 396 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CHRNB2P17787 502 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 PBX2P40425 430 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 FMO1Q01740 532 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 CCDC142Q17RM4 750 aa13.76□□□□□ -0.21
CBWD3-203ENST00000377344 HS1BP3Q53T59 392 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms