RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 FITM2Q8N6M3 262 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 TMEM35BQ8NCS4 154 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 KLF6Q99612 283 aaPredicted RBP17.14■□□□□ 0.33
TRIM27-202ENST00000377199 C12orf65Q9H3J6 166 aaKnown RBP17.14■□□□□ 0.33
TRIM27-202ENST00000377199 CCDC134Q9H6E4 229 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 DNAJC8O75937 253 aaPredicted RBP17.14■□□□□ 0.33
TRIM27-202ENST00000377199 RCOR2Q8IZ40 523 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 ZCCHC9Q8N567 271 aaKnown RBP17.14■□□□□ 0.33
TRIM27-202ENST00000377199 JOSD2Q8TAC2 188 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 KLHL29Q96CT2 875 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 IGF2BP3O00425 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 DNALI1O14645 258 aaPredicted RBP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 ASS1P00966 412 aaKnown RBP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 CD48P09326 243 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 GDF10P55107 478 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 IGBP1P78318 339 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 DENND1BQ6P3S1 775 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 TMEM192Q8IY95 271 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 P3H4Q92791 437 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 CFAP57Q96MR6 1250 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 NOD2Q9HC29 1040 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 NRBP2Q9NSY0 501 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 HOXC10Q9NYD6 342 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 A0A1W2PPM1 405 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 STAM2O75886 525 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 FARP2O94887 1054 aaPredicted RBP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 CA4P22748 312 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 SSTR1P30872 391 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 ALDH5A1P51649 535 aaPredicted RBP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 WDR4P57081 412 aaKnown RBP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 STAT4Q14765 748 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 WDR72Q3MJ13 1102 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 CGB2Q6NT52 195 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 WDTC1Q8N5D0 677 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 BBOF1Q8ND07 529 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 HSPH1Q92598 858 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 CEP83Q9Y592 693 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 ADGRA2Q96PE1 1338 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 ATP6V1G2O95670 118 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 PRKCBP05771 671 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 MAP2K2P36507 400 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 TAF5Q15542 800 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 HSDL1Q3SXM5 330 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 CCDC91Q7Z6B0 441 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 TRABDQ9H4I3 376 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 ALG13Q9NP73 1137 aaKnown RBP17.13■□□□□ 0.33
TRIM27-202ENST00000377199 KLHL14Q9P2G3 628 aa17.13■□□□□ 0.33
TRIM27-202ENST00000377199 FAM47DPA6NHR8 397 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 NOP56O00567 594 aaKnown RBP17.12■□□□□ 0.33
TRIM27-202ENST00000377199 CST8O60676 142 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 MAP3K6O95382 1288 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 CALB1P05937 261 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 NCALDP61601 193 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 EAPPQ56P03 285 aaPredicted RBP17.12■□□□□ 0.33
TRIM27-202ENST00000377199 TFDP3Q5H9I0 405 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 BRSK2Q8IWQ3 736 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 ACTL9Q8TC94 416 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 VCPIP1Q96JH7 1222 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 MRPL4Q9BYD3 311 aaKnown RBP17.12■□□□□ 0.33
TRIM27-202ENST00000377199 NIF3L1Q9GZT8 377 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 BTBD7Q9P203 1132 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 ARL2BPQ9Y2Y0 163 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 WDR81Q562E7 1941 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 RPA3P35244 121 aaPredicted RBP17.12■□□□□ 0.33
TRIM27-202ENST00000377199 IL9RQ01113 521 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 OTUD4Q01804 1114 aaKnown RBP17.12■□□□□ 0.33
TRIM27-202ENST00000377199 MGAT5Q09328 741 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 LAMTOR4Q0VGL1 99 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 PTPN20Q4JDL3 420 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 SWT1Q5T5J6 900 aaKnown RBP17.12■□□□□ 0.33
TRIM27-202ENST00000377199 ANKRD22Q5VYY1 191 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 GADL1Q6ZQY3 521 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 ALLCQ8N6M5 410 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 LRRN4Q8WUT4 740 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 KLRG1Q96E93 195 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 CALN1Q9BXU9 219 aa17.12■□□□□ 0.33
TRIM27-202ENST00000377199 hCG_1818297A0A087WSY0 165 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 TOM1L1O75674 476 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 KRT3P12035 628 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 IL1R2P27930 398 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 GCAP28676 217 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 OAZ1P54368 228 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 PSMC1P62191 440 aaKnown RBP17.11■□□□□ 0.33
TRIM27-202ENST00000377199 MAPK6Q16659 721 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 MSCO60682 206 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 CXCL8P10145 99 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 TAC1P20366 129 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 CLCN3P51790 818 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 MCCD1P59942 119 aaPredicted RBP17.11■□□□□ 0.33
TRIM27-202ENST00000377199 BASP1P80723 227 aaKnown RBP17.11■□□□□ 0.33
TRIM27-202ENST00000377199 LMNB2Q03252 620 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 SMC6Q96SB8 1091 aa17.11■□□□□ 0.33
TRIM27-202ENST00000377199 C19orf81C9J6K1 198 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 GRAP2O75791 330 aa17.1■□□□□ 0.33
TRIM27-202ENST00000377199 ITGBL1O95965 494 aaPredicted RBP17.1■□□□□ 0.33
TRIM27-202ENST00000377199 CTCFP49711 727 aaPredicted RBP17.1■□□□□ 0.33
TRIM27-202ENST00000377199 VCPP55072 806 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms