RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PAFAH2Q99487 392 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 TMEM121Q9BTD3 319 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 TIPINQ9BVW5 301 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 PCDHB2Q9Y5E7 798 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
TRIM39-201ENST00000376656 RNF8O76064 485 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 CPA2P48052 419 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ERFP50548 548 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 MCCD1P59942 119 aaPredicted RBP17.37■□□□□ 0.37
TRIM39-201ENST00000376656 MSS51Q4VC12 460 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 FAM182BQ5T319 152 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 LIN9Q5TKA1 542 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 BANPQ8N9N5 519 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ACSF2Q96CM8 615 aaPredicted RBP17.37■□□□□ 0.37
TRIM39-201ENST00000376656 RIT2Q99578 217 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 TUBB6Q9BUF5 446 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ST6GALNAC4Q9H4F1 302 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ARMCX1Q9P291 453 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 TBX20Q9UMR3 447 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 SERPINB4P48594 390 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 SPP2Q13103 211 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 LMBRD2Q68DH5 695 aaPredicted RBP17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ZNF184Q99676 751 aaPredicted RBP17.37■□□□□ 0.37
TRIM39-201ENST00000376656 MXRA8Q9BRK3 442 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 VPS11Q9H270 941 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ATP2A1O14983 1001 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 DNAJC6O75061 913 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 KRT1P04264 644 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 SNRPFP62306 86 aaKnown RBP17.37■□□□□ 0.37
TRIM39-201ENST00000376656 CYP24A1Q07973 514 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ZRSR2Q15696 482 aaKnown RBP17.37■□□□□ 0.37
TRIM39-201ENST00000376656 SLC5A9Q2M3M2 681 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 FAM102BQ5T8I3 360 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 ADGRD1Q6QNK2 874 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 IWS1Q96ST2 819 aa17.37■□□□□ 0.37
TRIM39-201ENST00000376656 DENND3A2RUS2 1198 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 RBM5P52756 815 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 HIF1AQ16665 826 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 FNBP1LQ5T0N5 605 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ANKRD22Q5VYY1 191 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 SLC39A4Q6P5W5 647 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 MFSD14AQ96MC6 490 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 GORASP1Q9BQQ3 440 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 WDR83Q9BRX9 315 aaKnown RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 PPCSQ9HAB8 311 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ARHGEF4Q9NR80 690 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 C1orf112Q9NSG2 853 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ZNF212Q9UDV6 495 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 SHOC2Q9UQ13 582 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 BTAF1O14981 1849 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ZNF536O15090 1300 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 SGK1O00141 431 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 DLDP09622 509 aaKnown RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 RARBP10826 455 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 PGM1P36871 562 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 PSMC4P43686 418 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 CCDC62Q6P9F0 684 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 TAB3Q8N5C8 712 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 TMC2Q8TDI7 906 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 C10orf88Q9H8K7 445 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 EHMT1Q9H9B1 1298 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 KCNH7Q9NS40 1196 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 MTO1Q9Y2Z2 717 aaKnown RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 PPEF1O14829 653 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 TM9SF1O15321 606 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ZCCHC18P0CG32 403 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ARL4CP56559 192 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 RPL7AP62424 266 aaKnown RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 PLCB3Q01970 1234 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 OASLQ15646 514 aaKnown RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 UGCGQ16739 394 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 SPOPLQ6IQ16 392 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 DRICH1Q6PGQ1 229 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-201ENST00000376656 C3orf62Q6ZUJ4 267 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ZNF677Q86XU0 584 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 TMEM161BQ8NDZ6 487 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 FBXO27Q8NI29 283 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 PYROXD1Q8WU10 500 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 ZDHHC15Q96MV8 337 aa17.36■□□□□ 0.37
TRIM39-201ENST00000376656 FCHO1O14526 889 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 DHX15O43143 795 aaKnown RBP17.35■□□□□ 0.37
TRIM39-201ENST00000376656 VCPP55072 806 aaKnown RBP17.35■□□□□ 0.37
TRIM39-201ENST00000376656 NOMO3P69849 1222 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 ENOSF1Q7L5Y1 443 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 RCOR2Q8IZ40 523 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 FAM161BQ96MY7 647 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 GBP5Q96PP8 586 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 DHRS4Q9BTZ2 278 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 MMADHCQ9H3L0 296 aaPredicted RBP17.35■□□□□ 0.37
TRIM39-201ENST00000376656 MRPL47Q9HD33 250 aaKnown RBP17.35■□□□□ 0.37
TRIM39-201ENST00000376656 IVNS1ABPQ9Y6Y0 642 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 MYL2P10916 166 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 BGNP21810 368 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 QARSP47897 775 aaKnown RBP17.35■□□□□ 0.37
TRIM39-201ENST00000376656 KRT72Q14CN4 511 aa17.35■□□□□ 0.37
TRIM39-201ENST00000376656 PLA2G4FQ68DD2 849 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms