RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 VDRP11473 427 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 EPHB2P29323 1055 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 PRAMEP78395 509 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 RNF219Q5W0B1 726 aaPredicted RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 RMDN1Q96DB5 314 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 CCDC195A0A1B0GUA6 201 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 CTIFO43310 598 aaKnown RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 COILP38432 576 aaPredicted RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 ITGA8P53708 1063 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 ZPBP2Q6X784 338 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 SPATS2Q86XZ4 545 aaKnown RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 MIB1Q86YT6 1006 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 KIAA0319LQ8IZA0 1049 aa18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 KLF6Q99612 283 aaPredicted RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 MORC2Q9Y6X9 1032 aaPredicted RBP18.84■□□□□ 0.61
PTPDC1-202ENST00000375360 AFDNP55196 1824 aaKnown RBP18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 EEF2KO00418 725 aaKnown RBP18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 CCNE2O96020 404 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 ADRB2P07550 413 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 ITIH2P19823 946 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 EFHC1Q5JVL4 640 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 MIIPQ5JXC2 388 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 FBXO47Q5MNV8 452 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 ALKBH8Q96BT7 664 aaKnown RBP18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 TMEM176AQ96HP8 235 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 RSAD1Q9HA92 442 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 XPNPEP3Q9NQH7 507 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 VAV3Q9UKW4 847 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 USP2O75604 605 aaPredicted RBP18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 TYK2P29597 1187 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 ZNF235Q14590 738 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 MFSD10Q14728 455 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 TAF1BQ53T94 588 aaPredicted RBP18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 RAB44Q7Z6P3 723 aaPredicted RBP18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 ELMOD1Q8N336 334 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 MMGT1Q8N4V1 131 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 CCNYL1Q8N7R7 359 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 TTC1Q99614 292 aa18.83■□□□□ 0.61
PTPDC1-202ENST00000375360 AKR1A1P14550 325 aa18.83■□□□□ 0.6
PTPDC1-202ENST00000375360 NDST1P52848 882 aa18.83■□□□□ 0.6
PTPDC1-202ENST00000375360 KCNMA1Q12791 1236 aa18.83■□□□□ 0.6
PTPDC1-202ENST00000375360 ABRAQ8N0Z2 381 aa18.83■□□□□ 0.6
PTPDC1-202ENST00000375360 GANCQ8TET4 914 aa18.83■□□□□ 0.6
PTPDC1-202ENST00000375360 TRIM56Q9BRZ2 755 aaKnown RBP18.83■□□□□ 0.6
PTPDC1-202ENST00000375360 ZFATQ9P243 1243 aa18.83■□□□□ 0.6
PTPDC1-202ENST00000375360 ACADSBP45954 432 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 COL14A1Q05707 1796 aaKnown RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 FSCN1Q16658 493 aaKnown RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 ITPRIPL1Q6GPH6 555 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 RSRC1Q96IZ7 334 aaKnown RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 XPO7Q9UIA9 1087 aaKnown RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 ROBO1Q9Y6N7 1651 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 SLC29A2Q14542 456 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 PAPD7Q5XG87 772 aaKnown RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 HIBCHQ6NVY1 386 aaPredicted RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 IRF2BP1Q8IU81 584 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 BRSK2Q8IWQ3 736 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 ADGRF2Q8IZF7 708 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 C4orf33Q8N1A6 199 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 ARHGEF26Q96DR7 871 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 ZIM3Q96PE6 472 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 ZSCAN5CA6NGD5 496 aaPredicted RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 RNF225M0QZC1 329 aaPredicted RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 NOP9Q86U38 636 aaKnown RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 PCSK9Q8NBP7 692 aaKnown RBP18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 PCDHB7Q9Y5E2 793 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 MYO9BQ13459 2157 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 SPATA31C2B4DYI2 1134 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 TGFB1I1O43294 461 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 BOLA3Q53S33 107 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 DEFB128Q7Z7B8 93 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 CEP120Q8N960 986 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 SLC8A2Q9UPR5 921 aa18.82■□□□□ 0.6
PTPDC1-202ENST00000375360 PAMP19021 973 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 ALDH7A1P49419 539 aaKnown RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 JADE1Q6IE81 842 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 PHLDB3Q6NSJ2 640 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 SPATA20Q8TB22 786 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 INPP4AQ96PE3 977 aaPredicted RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 ZC3H7BQ9UGR2 993 aaKnown RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 TPX2Q9ULW0 747 aaKnown RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 DPYSL4O14531 572 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 RBBP5Q15291 538 aaKnown RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 IQSEC1Q6DN90 963 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 RXFP2Q8WXD0 754 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 ANKRD7Q92527 254 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 NKRFO15226 690 aaKnown RBP eCLIP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 S100BP04271 92 aaPredicted RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 IRF1P10914 325 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 PSEN2P49810 448 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 GTF2BQ00403 316 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 PCSK7Q16549 785 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 LBX2Q6XYB7 198 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 CD302Q8IX05 232 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 DCP1BQ8IZD4 617 aaKnown RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 FAM8A1Q9UBU6 413 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 IGKV6D-41A0A0C4DH26 115 aa18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 UBA6A0AVT1 1052 aaPredicted RBP18.81■□□□□ 0.6
PTPDC1-202ENST00000375360 GMNCA6NCL1 334 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms