RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TCEA3O75764 348 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 UCHL3P15374 230 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 THOC5Q13769 683 aaKnown RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 RGS9BPQ6ZS82 235 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 ACAD11Q709F0 780 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 PRELID2Q8N945 189 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 SLC35G2Q8TBE7 412 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 GFM2Q969S9 779 aaKnown RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 FAM20AQ96MK3 541 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 LXNQ9BS40 222 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 EPB41L1Q9H4G0 881 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 ACAD9Q9H845 621 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 VAV3Q9UKW4 847 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 CYP3A7-CYP3A51PA0A087WV96 503 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 SLITRK3O94933 977 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 ASMTLO95671 621 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 GGPS1O95749 300 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 TTC4O95801 387 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 CYP3A7P24462 503 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 HSD17B4P51659 736 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 MARSP56192 900 aaKnown RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 SOX10P56693 466 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 WDR4P57081 412 aaKnown RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 COASYQ13057 564 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 EXOC3L4Q17RC7 722 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 KBTBD12Q3ZCT8 623 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 MTDHQ86UE4 582 aaKnown RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 OSGEPQ9NPF4 335 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 CLIC5Q9NZA1 410 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 NENFQ9UMX5 172 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 PCDHA3Q9Y5H8 950 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 WASF2Q9Y6W5 498 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 BRCA2P51587 3418 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 RASA4BC9J798 803 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 RASA4O43374 803 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 TPD52L2O43399 206 aaKnown RBP12.78□□□□□ -0.36
C9orf3-203ENST00000375315 HAUS5O94927 633 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 CYP11B2P19099 503 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 CD97P48960 835 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 KYNUQ16719 465 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 C6orf163Q5TEZ5 329 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 B3GNT6Q6ZMB0 384 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 SCUBE1Q8IWY4 988 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 RBM46Q8TBY0 533 aaKnown RBP12.78□□□□□ -0.36
C9orf3-203ENST00000375315 ZNF398Q8TD17 642 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 REEP2Q9BRK0 252 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 SLCO1B3Q9NPD5 702 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 NDE1Q9NXR1 346 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 MTUS1Q9ULD2 1270 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 NCANO14594 1321 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 THAP12O43422 761 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 PLA2G6O60733 806 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 PSMD10O75832 226 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 TROVE2P10155 538 aaKnown RBP eCLIP12.78□□□□□ -0.363e-7■■□□□ 13.3
C9orf3-203ENST00000375315 ACTN1P12814 892 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 MUTP22033 750 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 MLH1P40692 756 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 CASP5P51878 434 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 PLOD1Q02809 727 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-203ENST00000375315 PPATQ06203 517 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 KCNA1Q09470 495 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 KCNH2Q12809 1159 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 PPP2R5CQ13362 524 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 SFR1Q86XK3 245 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 UBL4BQ8N7F7 174 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 NSL1Q96IY1 281 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
C9orf3-203ENST00000375315 TIMMDC1Q9NPL8 285 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 NAALADL1Q9UQQ1 740 aa12.78□□□□□ -0.36
C9orf3-203ENST00000375315 TMEM253P0C7T8 217 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 CTNNA2P26232 953 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 CRABP2P29373 138 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 CIITAP33076 1130 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 DCTN2Q13561 401 aaKnown RBP12.77□□□□□ -0.36
C9orf3-203ENST00000375315 BTG3Q14201 252 aaPredicted RBP12.77□□□□□ -0.36
C9orf3-203ENST00000375315 FAM26FQ5R3K3 315 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 SEL1L2Q5TEA6 688 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 NLRX1Q86UT6 975 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 CYP4X1Q8N118 509 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 MYCT1Q8N699 235 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 CORO1BQ9BR76 489 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 TSPYL2Q9H2G4 693 aaPredicted RBP12.77□□□□□ -0.36
C9orf3-203ENST00000375315 UBN1Q9NPG3 1134 aa12.77□□□□□ -0.36
C9orf3-203ENST00000375315 CLIC2O15247 247 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 RNASEH1O60930 286 aaKnown RBP12.77□□□□□ -0.37
C9orf3-203ENST00000375315 BCRP11274 1271 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 ANPEPP15144 967 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 RPA1P27694 616 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 AP2B1P63010 937 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 PDK4Q16654 411 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 TMEM119Q4V9L6 283 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 DUS1LQ6P1R4 473 aaKnown RBP12.77□□□□□ -0.37
C9orf3-203ENST00000375315 TTC27Q6P3X3 843 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 SIKE1Q9BRV8 207 aa12.77□□□□□ -0.37
C9orf3-203ENST00000375315 SPATC1LQ9H0A9 340 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms