RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 USTQ9Y2C2 406 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 MGAMO43451 1857 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 ACKR2O00590 384 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CA12O43570 354 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 B4GALT4O60513 344 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 MSCO60682 206 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 KRT1P04264 644 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 KRT7P08729 469 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 ABHD2P08910 425 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CDH5P33151 784 aaPredicted RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 LACTBP83111 547 aaPredicted RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 MAP2K5Q13163 448 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CRHR2Q13324 411 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CYP4F22Q6NT55 531 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 TSHZ1Q6ZSZ6 1077 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 POLNQ7Z5Q5 900 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 UBR7Q8N806 425 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 RNF149Q8NC42 400 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CCDC197Q8NCU1 140 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 SEC16BQ96JE7 1060 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 CFAP57Q96MR6 1250 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 PCYT2Q99447 389 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 HAPLN2Q9GZV7 340 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 RPF1Q9H9Y2 349 aaKnown RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 PRMT7Q9NVM4 692 aaPredicted RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 CPSF3Q9UKF6 684 aaKnown RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 DRG1Q9Y295 367 aaKnown RBP12.93□□□□□ -0.34
UBR4-203ENST00000375225 EFR3BQ9Y2G0 817 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 ACTL7BQ9Y614 415 aa12.93□□□□□ -0.34
UBR4-203ENST00000375225 PTPRJQ12913 1337 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 IGKV6-21A0A0C4DH24 114 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 TMEM191CA6NGB0 347 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 SMIM23A6NLE4 172 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 SMAPO00193 183 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 CDH16O75309 829 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 ARIH2O95376 493 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 DESP17661 470 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 RGS2P41220 211 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 LIG3P49916 1009 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 POU5F1BQ06416 359 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 IFT88Q13099 833 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 AUHQ13825 339 aaKnown RBP12.92□□□□□ -0.34
UBR4-203ENST00000375225 ITIH4Q14624 930 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 ZNF568Q3ZCX4 644 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 MORN1Q5T089 497 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 ATF7IP2Q5U623 682 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 IZUMO3Q5VZ72 239 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 CCDC62Q6P9F0 684 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 SPATA33Q96N06 139 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 GPR20Q99678 358 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 TINF2Q9BSI4 451 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 NFKBIZQ9BYH8 718 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 LHX5Q9H2C1 402 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 ABHD16BQ9H3Z7 469 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 CREBZFQ9NS37 354 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 CISHQ9NSE2 258 aa12.92□□□□□ -0.34
UBR4-203ENST00000375225 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
UBR4-203ENST00000375225 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
UBR4-203ENST00000375225 TNPO2O14787 897 aaKnown RBP12.91□□□□□ -0.34
UBR4-203ENST00000375225 GH1P01241 217 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 SRGAP2CP0DJJ0 459 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 GHRP10912 638 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 DRD4P21917 467 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 ATICP31939 592 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 GJC1P36383 396 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 PHKA2P46019 1235 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 TFAMQ00059 246 aaKnown RBP12.91□□□□□ -0.34
UBR4-203ENST00000375225 IRF5Q13568 498 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 ACAP1Q15027 740 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 DEFB115Q30KQ5 88 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 TFDP3Q5H9I0 405 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 ZNF667Q5HYK9 610 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 ZNF484Q5JVG2 852 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 C6orf89Q6UWU4 347 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 PPP1R21Q6ZMI0 780 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 ARHGEF18Q6ZSZ5 1173 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
UBR4-203ENST00000375225 ZCCHC9Q8N567 271 aaKnown RBP12.91□□□□□ -0.34
UBR4-203ENST00000375225 EPS8L3Q8TE67 593 aaKnown RBP12.91□□□□□ -0.34
UBR4-203ENST00000375225 FNIP1Q8TF40 1166 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 SLITRK1Q96PX8 696 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 PHACTR1Q9C0D0 580 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 MTMR12Q9C0I1 747 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 KDM4CQ9H3R0 1056 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 ZNF148Q9UQR1 794 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
UBR4-203ENST00000375225 INO80B-WBP1J3KQ70 363 aa12.9□□□□□ -0.34
UBR4-203ENST00000375225 MAGEB2O15479 319 aa12.9□□□□□ -0.34
UBR4-203ENST00000375225 LIASO43766 372 aa12.9□□□□□ -0.34
UBR4-203ENST00000375225 ACSL3O95573 720 aa12.9□□□□□ -0.34
UBR4-203ENST00000375225 HOXC6P09630 235 aa12.9□□□□□ -0.34
UBR4-203ENST00000375225 PROZP22891 400 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms