RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 SRGAP2BP0DMP2 458 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 MTHFD1P11586 935 aaKnown RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 KRT13P13646 458 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 PRPHP41219 470 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 PSMC4P43686 418 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 DRG2P55039 364 aaKnown RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 DCAF7P61962 342 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 SLC7A5Q01650 507 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 EGR3Q06889 387 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 PCBP2Q15366 365 aaKnown RBP eCLIP2.53□□□□□ -2
CCDC7-204ENST00000375025 MUM1Q2TAK8 710 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 SUPT20HL1Q3ZLR7 823 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 PLEKHO1Q53GL0 409 aaPredicted RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 NUGGCQ68CJ6 796 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 BNC2Q6ZN30 1099 aaPredicted RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 CCDC149Q6ZUS6 474 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 GALNTL5Q7Z4T8 443 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 BRAPQ7Z569 592 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 RALYLQ86SE5 291 aaKnown RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 GALNT13Q8IUC8 556 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 MCATQ8IVS2 390 aaKnown RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 CRACR2BQ8N4Y2 399 aaPredicted RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 TSPYL6Q8N831 410 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 RNF141Q8WVD5 230 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 TAF4BQ92750 862 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 ITFG2Q969R8 447 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 COG3Q96JB2 828 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 C7orf26Q96N11 449 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 DEFB118Q96PH6 123 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 TSGA13Q96PP4 275 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 EYA3Q99504 573 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 MPHOSPH9Q99550 1183 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 GPATCH1Q9BRR8 931 aaKnown RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 RTKNQ9BST9 563 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 CENPOQ9BU64 300 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 STK31Q9BXU1 1019 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 TXLNGYQ9BZA5 131 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 MYOZ2Q9NPC6 264 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 STARD7Q9NQZ5 370 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 OLA1Q9NTK5 396 aaKnown RBP2.53□□□□□ -2
CCDC7-204ENST00000375025 KIF3AQ9Y496 699 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 MTCH2Q9Y6C9 303 aa2.53□□□□□ -2
CCDC7-204ENST00000375025 ABCC12Q96J65 1359 aa2.53□□□□□ -2.01
CCDC7-204ENST00000375025 ROBO3Q96MS0 1386 aa2.53□□□□□ -2.01
CCDC7-204ENST00000375025 HEG1Q9ULI3 1381 aa2.53□□□□□ -2.01
CCDC7-204ENST00000375025 PHIPQ8WWQ0 1821 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-204ENST00000375025 PRR5-ARHGAP8B1AHC4 643 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 N4BP3O15049 544 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 P4HA2O15460 535 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 AP1G1O43747 822 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 MGEA5O60502 916 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 MSCO60682 206 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 COQ9O75208 318 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 TUSC2O75896 110 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 KRT38O76015 456 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 SASH1O94885 1247 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 EFEMP2O95967 443 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 PLATP00750 562 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 MSL3P1P0C860 447 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 SCG2P13521 617 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 LIMK1P53667 647 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 IL2P60568 153 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 FKBP1AP62942 108 aaKnown RBP2.52□□□□□ -2.01
CCDC7-204ENST00000375025 VAMP2P63027 116 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 ARHGAP8P85298 464 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 DUSP4Q13115 394 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 PPIL2Q13356 520 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 KRTCAP3Q53RY4 240 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 SLC45A4Q5BKX6 768 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 WIPI1Q5MNZ9 446 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-204ENST00000375025 SLC30A6Q6NXT4 461 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 C16orf87Q6PH81 154 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 UNC5DQ6UXZ4 953 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 MILR1Q7Z6M3 343 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 ZNF605Q86T29 641 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 DDX53Q86TM3 631 aaKnown RBP2.52□□□□□ -2.01
CCDC7-204ENST00000375025 CDH24Q86UP0 819 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 EPHX4Q8IUS5 362 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 ZFPM1Q8IX07 1006 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 KIAA0319LQ8IZA0 1049 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 CARNMT1Q8N4J0 409 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 TP53I13Q8NBR0 393 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-204ENST00000375025 TOR1AIP2Q8NFQ8 470 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 KCTD13Q8WZ19 329 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 RADILQ96JH8 1075 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 CNDP2Q96KP4 475 aaKnown RBP2.52□□□□□ -2.01
CCDC7-204ENST00000375025 TBCBQ99426 244 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 SDF4Q9BRK5 362 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 FSD1Q9BTV5 496 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 KATNAL1Q9BW62 490 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 GTPBP4Q9BZE4 634 aaKnown RBP2.52□□□□□ -2.01
CCDC7-204ENST00000375025 EDEM3Q9BZQ6 932 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 TMPRSS5Q9H3S3 457 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 CNTD2Q9H8S5 307 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 SLC52A2Q9HAB3 445 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 MRGBPQ9NV56 204 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 GPATCH2Q9NW75 528 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 MKS1Q9NXB0 559 aa2.52□□□□□ -2.01
CCDC7-204ENST00000375025 FNIP2Q9P278 1114 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms