RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 DPF3Q92784 378 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 PCDHB18PQ96TA0 734 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 FAN1Q9Y2M0 1017 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
HLA-DMA-201ENST00000374843 A8MXQ7 604 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 I3L4J1 428 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 O00370 1275 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 ZSCAN12O43309 604 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 MED7O43513 233 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 CALCAP01258 141 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 CYP1A1P04798 512 aaPredicted RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 ALDH2P05091 517 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 LAG3P18627 525 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 CDH5P33151 784 aaPredicted RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 VAV2P52735 878 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 ELAVL2Q12926 359 aaKnown RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 STILQ15468 1287 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 CLEC16AQ2KHT3 1053 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 ARHGAP17Q68EM7 881 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 ALKBH5Q6P6C2 394 aaKnown RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 TMCO2Q7Z6W1 182 aaPredicted RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 RNF168Q8IYW5 571 aaPredicted RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 SP7Q8TDD2 431 aaPredicted RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 TNIP3Q96KP6 325 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 YME1L1Q96TA2 773 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 LUC7LQ9NQ29 371 aaKnown RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 PCDHA13Q9Y5I0 950 aa18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 MRPL42Q9Y6G3 142 aaKnown RBP18.32■□□□□ 0.52
HLA-DMA-201ENST00000374843 GOLGA6L9A6NEM1 432 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 ESPNB1AK53 854 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 UNGP13051 313 aaPredicted RBP18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 CD19P15391 556 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 PCSK1P29120 753 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 CYP27A1Q02318 531 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 ORC1Q13415 861 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 BTG3Q14201 252 aaPredicted RBP18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 SGO2Q562F6 1265 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 PPP1R2P3Q6NXS1 205 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 TMEM173Q86WV6 379 aaPredicted RBP18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 METTL23Q86XA0 190 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 HERC6Q8IVU3 1022 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 REXO1L1PQ8IX06 675 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 TXLNBQ8N3L3 684 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 BCL7CQ8WUZ0 217 aaPredicted RBP18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 PPP1R13BQ96KQ4 1090 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 RTP3Q9BQQ7 232 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 ISCUQ9H1K1 167 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 LHX5Q9H2C1 402 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 DPEP3Q9H4B8 488 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 INTUQ9ULD6 942 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 SLC4A7Q9Y6M7 1214 aa18.31■□□□□ 0.52
HLA-DMA-201ENST00000374843 KIAA1671Q9BY89 1806 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 USP27XA6NNY8 438 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 PJA2O43164 708 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 HCRTO43612 131 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 TADA2AO75478 443 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 CAPN15O75808 1086 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 OAZ2O95190 189 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 LINC00271P0C7V0 271 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 FGFR3P22607 806 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 LMO2P25791 158 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 NOMO3P69849 1222 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 CENPCQ03188 943 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 CNGA2Q16280 664 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 CCDC122Q5T0U0 273 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 FAM117BQ6P1L5 589 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 FUT10Q6P4F1 479 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 LCLAT1Q6UWP7 414 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 ACOT1Q86TX2 421 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 SLC39A11Q8N1S5 342 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 B3GALNT2Q8NCR0 500 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 ZNF558Q96NG5 402 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 DDX43Q9NXZ2 648 aaKnown RBP18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 PUF60Q9UHX1 559 aaKnown RBP18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 CDH9Q9ULB4 789 aa18.3■□□□□ 0.52
HLA-DMA-201ENST00000374843 CFHP08603 1231 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 ATP2A2P16615 1042 aaKnown RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 TKTP29401 623 aaKnown RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 ARHGAP25P42331 645 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 MAGEA1P43355 309 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 MAGEA10P43363 369 aaPredicted RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 ALDH7A1P49419 539 aaKnown RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 KIAA0319Q5VV43 1072 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 OVOS1Q6IE37 1185 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 KCNT2Q6UVM3 1135 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 C17orf53Q8N3J3 647 aaPredicted RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 COLGALT1Q8NBJ5 622 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 IGSF21Q96ID5 467 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 HEXIM2Q96MH2 286 aaKnown RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 PKMYT1Q99640 499 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 SYT15Q9BQS2 421 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 ACBD6Q9BR61 282 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 ZNF518BQ9C0D4 1074 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 SEPT11Q9NVA2 429 aaKnown RBP18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 TAS2R14Q9NYV8 317 aa18.29■□□□□ 0.52
HLA-DMA-201ENST00000374843 INSL6Q9Y581 213 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms