RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 HCRTO43612 131 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 GLP2RO95838 553 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 WEE2P0C1S8 567 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 OR4Q2P0C623 313 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 SRGAP2BP0DMP2 458 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 EPCAMP16422 314 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 LMO2P25791 158 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 TSPY1Q01534 308 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 GCNT1Q02742 428 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 SMARCB1Q12824 385 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-201ENST00000374673 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 UNC93AQ86WB7 457 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 PALB2Q86YC2 1186 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 ARHGEF19Q8IW93 802 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 DCP1BQ8IZD4 617 aaKnown RBP16.04■□□□□ 0.16
HSPG2-201ENST00000374673 PPM1KQ8N3J5 372 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 TTC39CQ8N584 583 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 VN1R2Q8NFZ6 395 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 MAFAQ8NHW3 353 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-201ENST00000374673 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 CASP10Q92851 521 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 PABPC5Q96DU9 382 aaKnown RBP16.04■□□□□ 0.16
HSPG2-201ENST00000374673 PKMYT1Q99640 499 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 SYT15Q9BQS2 421 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 MAFFQ9ULX9 164 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 BARX2Q9UMQ3 279 aaPredicted RBP16.04■□□□□ 0.16
HSPG2-201ENST00000374673 LINC01565O15544 149 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 CILPO75339 1184 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 ATF2P15336 505 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 ACAT1P24752 427 aaKnown RBP16.03■□□□□ 0.16
HSPG2-201ENST00000374673 ARPP19P56211 112 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 YWHAEP62258 255 aaKnown RBP16.03■□□□□ 0.16
HSPG2-201ENST00000374673 PHLDB3Q6NSJ2 640 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 FAM171BQ6P995 826 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 LRRTM3Q86VH5 581 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 UBR7Q8N806 425 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 FAM81BQ96LP2 452 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 ARID3AQ99856 593 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 PLEKHA4Q9H4M7 779 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 SIX2Q9NPC8 291 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 CISHQ9NSE2 258 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 APEX2Q9UBZ4 518 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 AFF4Q9UHB7 1163 aaKnown RBP16.03■□□□□ 0.16
HSPG2-201ENST00000374673 DPP7Q9UHL4 492 aa16.03■□□□□ 0.16
HSPG2-201ENST00000374673 A0A1B0GTH6 734 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 MTMR11A4FU01 709 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 PDGFRBP09619 1106 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 CD58P19256 250 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 NDST1P52848 882 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 RBM10P98175 930 aaKnown RBP16.02■□□□□ 0.16
HSPG2-201ENST00000374673 UBXN1Q04323 297 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 FILIP1LQ4L180 1135 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 SLC39A12Q504Y0 691 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 SMYD5Q6GMV2 418 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 DPY19L2P1Q6NXN4 242 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 LLGL2Q6P1M3 1020 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 ELMSAN1Q6PJG2 1045 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 RNF19BQ6ZMZ0 732 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 ENOSF1Q7L5Y1 443 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 KREMEN2Q8NCW0 462 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 RNF214Q8ND24 703 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 WHAMMQ8TF30 809 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 C2orf15Q8WU43 125 aaKnown RBP16.02■□□□□ 0.16
HSPG2-201ENST00000374673 PPM1EQ8WY54 764 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 JAKMIP2Q96AA8 810 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 TNIP3Q96KP6 325 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 ERGIC2Q96RQ1 377 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.16
HSPG2-201ENST00000374673 MAN1C1Q9NR34 630 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 CLDND1Q9NY35 253 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 HSFX1Q9UBD0 423 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 HMGXB4Q9UGU5 601 aa16.02■□□□□ 0.16
HSPG2-201ENST00000374673 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-201ENST00000374673 MYBPHLA2RUH7 354 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 ATP2C2O75185 946 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 TBX10O75333 385 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 VNN2O95498 520 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 SERPINC1P01008 464 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 LTBRP36941 435 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 PSMC1P62191 440 aaKnown RBP16.01■□□□□ 0.15
HSPG2-201ENST00000374673 FANCCQ00597 558 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 ADCY1Q08828 1119 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 MAPRE1Q15691 268 aaKnown RBP16.01■□□□□ 0.15
HSPG2-201ENST00000374673 NFE2Q16621 373 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-201ENST00000374673 ANKRD54Q6NXT1 300 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 RTL10Q7L3V2 364 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 RRAGAQ7L523 313 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 TCEAL8Q8IYN2 117 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 CRYBG2Q8N1P7 616 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 B3GALNT2Q8NCR0 500 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 SPPL2BQ8TCT7 592 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 KAT5Q92993 513 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 KREMEN1Q96MU8 473 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 PGLYRP2Q96PD5 576 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 TWNKQ96RR1 684 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 NT5C1AQ9BXI3 368 aa16.01■□□□□ 0.15
HSPG2-201ENST00000374673 DPEP3Q9H4B8 488 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms