RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PQBP1O60828 265 aaKnown RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 ZC3H11AO75152 810 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 CSDE1O75534 798 aaKnown RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 MYBL1P10243 752 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 CLCN3P51790 818 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 NAA30Q147X3 362 aaPredicted RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 SLC7A14Q8TBB6 771 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 MCEEQ96PE7 176 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 TSSK1BQ9BXA7 367 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 CD274Q9NZQ7 290 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 SETBP1Q9Y6X0 1596 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 TTC26A0AVF1 554 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 HBP1O60381 514 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 LRG1P02750 347 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 HIST1H2AGP0C0S8 130 aaPredicted RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 HIST1H2ADP20671 130 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 BACE1P56817 501 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 ARHGAP17Q68EM7 881 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 ERO1BQ86YB8 467 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 GUF1Q8N442 669 aaKnown RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 HIST1H2AHQ96KK5 128 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 DNAJC7Q99615 494 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 HIST1H2AJQ99878 128 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 FAM118BQ9BPY3 351 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 H2AFJQ9BTM1 129 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 RNPEPQ9H4A4 650 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 TBC1D23Q9NUY8 699 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 MEGF6O75095 1541 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 DIP2BQ9P265 1576 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 LAYNQ6UX15 382 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 FGD2Q7Z6J4 655 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 VPS50Q96JG6 964 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 DTNAQ9Y4J8 743 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 CHN1P15882 459 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 DDX5P17844 614 aaKnown RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 GOLGA7BQ2TAP0 167 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 P3H1Q32P28 736 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 RIN3Q8TB24 985 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 YME1L1Q96TA2 773 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 TARS2Q9BW92 718 aaKnown RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 GPRC5CQ9NQ84 441 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 LINC00854A0A1B0GVQ3 168 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 C16orf96A6NNT2 1141 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 DCDC2CA8MYV0 355 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 ITGB3P05106 788 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 AP3M2P53677 418 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 FBXW10Q5XX13 1052 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 C4orf33Q8N1A6 199 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 DIS3LQ8TF46 1054 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 TASP1Q9H6P5 420 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 PDIA5Q14554 519 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 C10orf120Q5SQS8 335 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 TBC1D19Q8N5T2 526 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 SCFD1Q8WVM8 642 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 CHORDC1Q9UHD1 332 aaPredicted RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 CNTNAP5Q8WYK1 1306 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 FAM187AA6NFU0 413 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 ICAM1P05362 532 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 CDH2P19022 906 aaPredicted RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 SCP2P22307 547 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 NOTUMQ6P988 496 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 LUZP2Q86TE4 346 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 EFHBQ8N7U6 833 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 SNRNP27Q8WVK2 155 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 DDX50Q9BQ39 737 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 MTA3Q9BTC8 594 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 THTPAQ9BU02 230 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 FHDC1Q9C0D6 1143 aaPredicted RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 RERGLQ9H628 205 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 ARHGEF38Q9NXL2 777 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 EPB42P16452 691 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 RFC5P40937 340 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 CLK1P49759 484 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 DHX40Q8IX18 779 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 SLC25A41Q8N5S1 370 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 C18orf8Q96DM3 657 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 ERLEC1Q96DZ1 483 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 TRIM9Q9C026 710 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 HOXA7P31268 230 aaPredicted RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 RFX5P48382 616 aaPredicted RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 CDC42EP1Q00587 391 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 USP10Q14694 798 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 TRIP4Q15650 581 aaPredicted RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 METTL16Q86W50 562 aaKnown RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 RBBP8NLQ8NC74 664 aaPredicted RBP14.94□□□□□ -0.02
TRAF1-201ENST00000373887 ASAP3Q8TDY4 903 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 PPP1R13LQ8WUF5 828 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 STARD7Q9NQZ5 370 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 NAGPAQ9UK23 515 aa14.94□□□□□ -0.02
TRAF1-201ENST00000373887 ATMINO43313 823 aaPredicted RBP14.93□□□□□ -0.02
TRAF1-201ENST00000373887 TSC22D2O75157 780 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CYP2C8P10632 490 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 SV2CQ496J9 727 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 FRMD5Q7Z6J6 570 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 CNBD2Q96M20 576 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 SENP7Q9BQF6 1050 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 TRIM51Q9BSJ1 452 aa14.93□□□□□ -0.02
TRAF1-201ENST00000373887 ANO9A1A5B4 782 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms