RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 DFFAO00273 331 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PTENP60484 403 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 DEUP1Q05D60 604 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 CYTH1Q15438 398 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PDCD2Q16342 344 aaPredicted RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ITPRIPL1Q6GPH6 555 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ZNF677Q86XU0 584 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 KCND1Q9NSA2 647 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 SIK3Q9Y2K2 1263 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 UBA6A0AVT1 1052 aaPredicted RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 AIM2O14862 343 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 KLRC4O43908 158 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 GYS1P13807 737 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 SHMT1P34896 483 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 TPI1P60174 286 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ZNF844Q08AG5 666 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 TRIP10Q15642 601 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 GRIK5Q16478 980 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PPIL6Q8IXY8 311 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ZNF507Q8TCN5 953 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 TNIP3Q96KP6 325 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 NT5C1AQ9BXI3 368 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 DEFB129Q9H1M3 183 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 OLFML3Q9NRN5 406 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PAK5Q9P286 719 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 HEY2Q9UBP5 337 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 DDX20Q9UHI6 824 aaKnown RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 TRAF3IP3Q9Y228 551 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PPME1Q9Y570 386 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ATP8B3O60423 1300 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ARHGEF37A1IGU5 675 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 EML1O00423 815 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PYGMP11217 842 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 GEMIN4P57678 1058 aaKnown RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 IL17AQ16552 155 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ZBTB41Q5SVQ8 909 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 LRRC6Q86X45 466 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 APOBEC3FQ8IUX4 373 aaKnown RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PRPF31Q8WWY3 499 aaKnown RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 E2F7Q96AV8 911 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 FAM129AQ9BZQ8 928 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 ING2Q9H160 280 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 KIF9Q9HAQ2 790 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PALMDQ9NP74 551 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 PDE4DIPQ5VU43 2346 aa11.38□□□□□ -0.59
CSMD2-204ENST00000373380 MARF1Q9Y4F3 1742 aaKnown RBP11.38□□□□□ -0.59
CSMD2-204ENST00000373380 E2F6O75461 281 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SLURP2P0DP57 97 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 CASP5P51878 434 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 CHI3L2Q15782 390 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 EMC1Q8N766 993 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 NCLNQ969V3 563 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 IFT43Q96FT9 208 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 MTMR12Q9C0I1 747 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 ELP3Q9H9T3 547 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 MAFGO15525 162 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SUPT3HO75486 399 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 ICAM1P05362 532 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 TCN1P20061 433 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SULT1E1P49888 294 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 ANGEL2Q5VTE6 544 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 NLRP9Q7RTR0 991 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 TMC3Q7Z5M5 1100 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SNRNP27Q8WVK2 155 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 TMA16Q96EY4 203 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 ZDHHC15Q96MV8 337 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SPEF2Q9C093 1822 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 A0A0A6YYK5 440 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SLITRK3O94933 977 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SOX11P35716 441 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 TSPY1Q01534 308 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 MED21Q13503 144 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 DCAF6Q58WW2 860 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 TMEM154Q6P9G4 183 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 NT5DC3Q86UY8 548 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 DDIASQ8IXT1 998 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 THEM5Q8N1Q8 247 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 ACP6Q9NPH0 428 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 RHBDL2Q9NX52 303 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 DLGAP2Q9P1A6 1054 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 GTPBP10A4D1E9 387 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 TISP43B9A030 160 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 HNRNPCL1O60812 293 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 ITGB3P05106 788 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 NQO1P15559 274 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 SNRPFP62306 86 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 OTUD4Q01804 1114 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 USP10Q14694 798 aaKnown RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 LRRC8EQ6NSJ5 796 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 EFCAB12Q6NXP0 572 aa11.37□□□□□ -0.59
CSMD2-204ENST00000373380 RIBC1Q8N443 379 aaPredicted RBP11.37□□□□□ -0.59
CSMD2-204ENST00000373380 MTO1Q9Y2Z2 717 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms