RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 HCFC1R1Q9NWW0 138 aa13.49□□□□□ -0.25
SNCG-202ENST00000372017 ZDHHC7Q9NXF8 308 aa13.49□□□□□ -0.25
SNCG-202ENST00000372017 ARMCX3Q9UH62 379 aaPredicted RBP13.49□□□□□ -0.25
SNCG-202ENST00000372017 SLC27A5Q9Y2P5 690 aa13.49□□□□□ -0.25
SNCG-202ENST00000372017 ARHGEF37A1IGU5 675 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 MYBPHLA2RUH7 354 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 TACC1O75410 805 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 SOAT2O75908 522 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 GTF2H1P32780 548 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 PIK3CAP42336 1068 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 DUSP4Q13115 394 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 SGSM1Q2NKQ1 1148 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 PPM1LQ5SGD2 360 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 CCDC183Q5T5S1 534 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 TCERG1LQ5VWI1 586 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 KRT39Q6A163 491 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 POTEHQ6S545 545 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 SCARA5Q6ZMJ2 495 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 C11orf57Q6ZUT1 292 aaPredicted RBP13.48□□□□□ -0.25
SNCG-202ENST00000372017 TRIM59Q8IWR1 403 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 THEM5Q8N1Q8 247 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 TMEM86AQ8N2M4 240 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 TATDN2Q93075 761 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 ACBD6Q9BR61 282 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 OXCT2Q9BYC2 517 aaPredicted RBP13.48□□□□□ -0.25
SNCG-202ENST00000372017 DPEP3Q9H4B8 488 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 CRTAC1Q9NQ79 661 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 CEP72Q9P209 647 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 DNMT3BQ9UBC3 853 aaKnown RBP13.48□□□□□ -0.25
SNCG-202ENST00000372017 GTF3C4Q9UKN8 822 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 COQ4Q9Y3A0 265 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 R3HCC1Q9Y3T6 440 aaKnown RBP13.48□□□□□ -0.25
SNCG-202ENST00000372017 INSL5Q9Y5Q6 135 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 PTPRDP23468 1912 aa13.48□□□□□ -0.25
SNCG-202ENST00000372017 FAM86C2PA6NEL3 165 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 SP100P23497 879 aaPredicted RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 ASPAP45381 313 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 LHX1P48742 406 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 MXI1P50539 228 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 PSMC1P62191 440 aaKnown RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 TNNC1P63316 161 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 CCDC40Q4G0X9 1142 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 ZNF667Q5HYK9 610 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 INTS6LQ5JSJ4 861 aaKnown RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 ATAT1Q5SQI0 421 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 CES5AQ6NT32 575 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 FAM171BQ6P995 826 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 GRASPQ7Z6J2 395 aaPredicted RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 SMG7Q92540 1137 aaKnown RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNCG-202ENST00000372017 PHF7Q9BWX1 381 aaPredicted RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 RHOBTB2Q9BYZ6 727 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 DNAJC25Q9H1X3 360 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 METTL14Q9HCE5 456 aaKnown RBP13.47□□□□□ -0.25
SNCG-202ENST00000372017 RAB20Q9NX57 234 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 HMGXB4Q9UGU5 601 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 DPP7Q9UHL4 492 aa13.47□□□□□ -0.25
SNCG-202ENST00000372017 PRRG1O14668 218 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNCG-202ENST00000372017 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.25
SNCG-202ENST00000372017 HOXA9P31269 272 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 ELF1P32519 619 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 MTHFRP42898 656 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 FMO5P49326 533 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 GPR15P49685 360 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 NOP14P78316 857 aaKnown RBP13.46□□□□□ -0.25
SNCG-202ENST00000372017 MYL7Q01449 175 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 TWF1Q12792 350 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 ORC1Q13415 861 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 HSP90AA4PQ58FG1 418 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 ADHFE1Q8IWW8 467 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 FBXL13Q8NEE6 735 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 LMO3Q8TAP4 145 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 TAF4BQ92750 862 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
SNCG-202ENST00000372017 RIPOR3Q96MK2 946 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 SYT15Q9BQS2 421 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 BCO2Q9BYV7 579 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 WDR6Q9NNW5 1121 aaKnown RBP13.46□□□□□ -0.25
SNCG-202ENST00000372017 SAMSN1Q9NSI8 373 aaKnown RBP13.46□□□□□ -0.25
SNCG-202ENST00000372017 YIPF1Q9Y548 306 aa13.46□□□□□ -0.25
SNCG-202ENST00000372017 DOCK8Q8NF50 2099 aa13.46□□□□□ -0.26
SNCG-202ENST00000372017 C2CD4DB7Z1M9 353 aa13.45□□□□□ -0.26
SNCG-202ENST00000372017 LOC730098B7Z3J9 87 aa13.45□□□□□ -0.26
SNCG-202ENST00000372017 POU2F2P09086 479 aa13.45□□□□□ -0.26
SNCG-202ENST00000372017 FAM163BP0C2L3 166 aa13.45□□□□□ -0.26
SNCG-202ENST00000372017 ATF6P18850 670 aa13.45□□□□□ -0.26
SNCG-202ENST00000372017 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
SNCG-202ENST00000372017 GNL1P36915 607 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms