RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 OPTNQ96CV9 577 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 SEC16BQ96JE7 1060 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 RNPEPQ9H4A4 650 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 STRIP2Q9ULQ0 834 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 CCDC38Q502W7 563 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 ERAP1Q9NZ08 941 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 NINJ2Q9NZG7 142 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 RNF181Q9P0P0 153 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 CPP00450 1065 aa30.57■■■□□ 2.48
SSBP3-204ENST00000371320 IGBP1P78318 339 aa30.57■■■□□ 2.48
SSBP3-204ENST00000371320 ZNF667Q5HYK9 610 aa30.57■■■□□ 2.48
SSBP3-204ENST00000371320 PRUNE1Q86TP1 453 aa30.57■■■□□ 2.48
SSBP3-204ENST00000371320 NIPA2Q8N8Q9 360 aa30.57■■■□□ 2.48
SSBP3-204ENST00000371320 DDX56Q9NY93 547 aaKnown RBP30.57■■■□□ 2.48
SSBP3-204ENST00000371320 DNPEPQ9ULA0 475 aa30.57■■■□□ 2.48
SSBP3-204ENST00000371320 ZNF148Q9UQR1 794 aa30.57■■■□□ 2.48
SSBP3-204ENST00000371320 MED7O43513 233 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 C22orf31O95567 290 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 IQCF3P0C7M6 154 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 POLR2BP30876 1174 aaKnown RBP30.56■■■□□ 2.48
SSBP3-204ENST00000371320 RAP1GAPP47736 663 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 GKAP1Q5VSY0 366 aaPredicted RBP30.56■■■□□ 2.48
SSBP3-204ENST00000371320 EXOC3L1Q86VI1 746 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 CACNA2D3Q8IZS8 1091 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 CCHCR1Q8TD31 782 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 PRMT7Q9NVM4 692 aaPredicted RBP30.56■■■□□ 2.48
SSBP3-204ENST00000371320 P3H1Q32P28 736 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 WDR72Q3MJ13 1102 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 TTC31Q49AM3 519 aaPredicted RBP30.56■■■□□ 2.48
SSBP3-204ENST00000371320 TXNRD3NBQ6F5E7 133 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 DRICH1Q6PGQ1 229 aaPredicted RBP30.56■■■□□ 2.48
SSBP3-204ENST00000371320 CABS1Q96KC9 395 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 NFKBIZQ9BYH8 718 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 LHX5Q9H2C1 402 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 SIX4Q9UIU6 781 aa30.56■■■□□ 2.48
SSBP3-204ENST00000371320 ASB14A6NK59 587 aa30.55■■■□□ 2.48
SSBP3-204ENST00000371320 GPR25O00155 361 aa30.55■■■□□ 2.48
SSBP3-204ENST00000371320 PHKA2P46019 1235 aa30.55■■■□□ 2.48
SSBP3-204ENST00000371320 EAPPQ56P03 285 aaPredicted RBP30.55■■■□□ 2.48
SSBP3-204ENST00000371320 HIBCHQ6NVY1 386 aaPredicted RBP30.55■■■□□ 2.48
SSBP3-204ENST00000371320 ZNF317Q96PQ6 595 aaPredicted RBP30.55■■■□□ 2.48
SSBP3-204ENST00000371320 LOC102724159A0A0B4J2E5 919 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 GOLGA8SH3BPF8 625 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 NFICP08651 508 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 ATP5DP30049 168 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 PTPN7P35236 360 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 SLC20A2Q08357 652 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 PWP2Q15269 919 aaKnown RBP30.54■■■□□ 2.48
SSBP3-204ENST00000371320 PTPN20Q4JDL3 420 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 TFDP3Q5H9I0 405 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 ACSF2Q96CM8 615 aaPredicted RBP30.54■■■□□ 2.48
SSBP3-204ENST00000371320 BCO2Q9BYV7 579 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 IFT122Q9HBG6 1241 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 LRRD1A4D1F6 860 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 CDH8P55286 799 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 ZNF484Q5JVG2 852 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 C1orf127Q8N9H9 656 aa30.54■■■□□ 2.48
SSBP3-204ENST00000371320 ARHGEF2Q92974 986 aaKnown RBP30.54■■■□□ 2.48
SSBP3-204ENST00000371320 FHDC1Q9C0D6 1143 aaPredicted RBP30.54■■■□□ 2.48
SSBP3-204ENST00000371320 SRCAPQ6ZRS2 3230 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 hCG_1818297A0A087WSY0 165 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 LACTBL1A8MY62 500 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 STAG3L1P0CL83 205 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 INSRRP14616 1297 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 RELL1Q8IUW5 271 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 PRMT1Q99873 361 aaKnown RBP30.53■■■□□ 2.48
SSBP3-204ENST00000371320 FOXP3Q9BZS1 431 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 SBF1O95248 1867 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 TCEA3O75764 348 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 KRT3P12035 628 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 PSMA2P25787 234 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 RFC1P35251 1148 aaPredicted RBP30.53■■■□□ 2.48
SSBP3-204ENST00000371320 RAD23BP54727 409 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 CEP128Q6ZU80 1094 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 ARMCX2Q7L311 632 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 ZCCHC9Q8N567 271 aaKnown RBP30.53■■■□□ 2.48
SSBP3-204ENST00000371320 ALLCQ8N6M5 410 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 CYTH4Q9UIA0 394 aa30.53■■■□□ 2.48
SSBP3-204ENST00000371320 MCM3APO60318 1980 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 SIGLEC16A6NMB1 481 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 CSDE1O75534 798 aaKnown RBP30.52■■■□□ 2.48
SSBP3-204ENST00000371320 CDKN2BP42772 138 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 CNGA2Q16280 664 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 CCDC121Q6ZUS5 278 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 PACS2Q86VP3 889 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 CCDC134Q9H6E4 229 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 EFCC1Q9HA90 598 aa30.52■■■□□ 2.48
SSBP3-204ENST00000371320 DRG1Q9Y295 367 aaKnown RBP30.52■■■□□ 2.48
SSBP3-204ENST00000371320 PSMC1P62191 440 aaKnown RBP30.51■■■□□ 2.48
SSBP3-204ENST00000371320 TNFAIP2Q03169 654 aa30.51■■■□□ 2.48
SSBP3-204ENST00000371320 ARHGAP1Q07960 439 aa30.51■■■□□ 2.48
SSBP3-204ENST00000371320 FAM187BQ17R55 369 aa30.51■■■□□ 2.48
SSBP3-204ENST00000371320 JADE1Q6IE81 842 aa30.51■■■□□ 2.48
SSBP3-204ENST00000371320 GLIS1Q8NBF1 620 aa30.51■■■□□ 2.48
SSBP3-204ENST00000371320 RBM15Q96T37 977 aaKnown RBP eCLIP30.51■■■□□ 2.48
SSBP3-204ENST00000371320 SDCBP2Q9H190 292 aa30.51■■■□□ 2.48
SSBP3-204ENST00000371320 ITGB3P05106 788 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 MCF2P10911 925 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 ARSEP51690 589 aa30.51■■■□□ 2.47
SSBP3-204ENST00000371320 POU5F1BQ06416 359 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms