RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 TSPAN17Q96FV3 270 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 SKAP2O75563 359 aaPredicted RBP17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 AKAP3O75969 853 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 IREB2P48200 963 aaKnown RBP17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 TTLL4Q14679 1199 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 NFIXQ14938 502 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 SNRNP27Q8WVK2 155 aaKnown RBP17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 COG4Q9H9E3 785 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 SNX9Q9Y5X1 595 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 IGSF9BQ9UPX0 1349 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 CEP152O94986 1710 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 PSMD3O43242 534 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 TRAPPC3O43617 180 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 GPD1P21695 349 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 GIT2Q14161 759 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 SLC44A4Q53GD3 710 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 C6orf10Q5SRN2 563 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 SPATA33Q96N06 139 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 ARHGEF38Q9NXL2 777 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 SLC24A2Q9UI40 661 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 NAALADL1Q9UQQ1 740 aa17.88■□□□□ 0.45
PTP4A1-201ENST00000370651 CYP11B1P15538 503 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 EMC2Q15006 297 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 KDELC2Q7Z4H8 507 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 ELMO2Q96JJ3 720 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 DNAAF5Q86Y56 855 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 PAFAH2Q99487 392 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 DUSP9Q99956 384 aaKnown RBP17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 NSMCE4AQ9NXX6 385 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 LRFN2Q9ULH4 789 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 PJA2O43164 708 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 NTSR2O95665 410 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 SYF2O95926 243 aaKnown RBP17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 PLOD1Q02809 727 aaPredicted RBP17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 WASHC2DQ5SRD0 308 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 ASAP3Q8TDY4 903 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 BEGAINQ9BUH8 593 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 IQGAP1P46940 1657 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 LRRC10BA6NIK2 292 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 ZBTB39O15060 712 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 BRD2P25440 801 aaKnown RBP17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 RASA2Q15283 850 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 WLSQ5T9L3 541 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 CYP4A22Q5TCH4 519 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 IZUMO2Q6UXV1 221 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 ZNF669Q96BR6 464 aaPredicted RBP17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 TMEM120AQ9BXJ8 343 aa17.87■□□□□ 0.45
PTP4A1-201ENST00000370651 TBC1D4O60343 1298 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 MXD4Q14582 209 aaPredicted RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 C11orf63Q6NUN7 778 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 TTC33Q6PID6 262 aaPredicted RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 FRMD8P1Q9BZ68 369 aaPredicted RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 METTL5Q9NRN9 209 aaKnown RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 A0A087X0B3 334 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 GTPBP10A4D1E9 387 aaKnown RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 ATP9AO75110 1047 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 BAATQ14032 418 aaPredicted RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 PDK1Q15118 436 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 LAYNQ6UX15 382 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 GLRA3O75311 464 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 MAP3K10Q02779 954 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 CUL2Q13617 745 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 CCNG2Q16589 344 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 TTMPQ5BVD1 217 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 EARS2Q5JPH6 523 aaKnown RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 PLD3Q8IV08 490 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 OLFML3Q9NRN5 406 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 ANKEF1Q9NU02 776 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 TEKT2Q9UIF3 430 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 TBX20Q9UMR3 447 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 KRT8P05787 483 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 CDH2P19022 906 aaPredicted RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 CDC42EP5Q6NZY7 148 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 PGM2Q96G03 612 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 CNDP1Q96KN2 507 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 ILKAPQ9H0C8 392 aaPredicted RBP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 TAGLN3Q9UI15 199 aa17.86■□□□□ 0.45
PTP4A1-201ENST00000370651 USP32Q8NFA0 1604 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 GPR75-ASB3A0A0A6YYF3 556 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 FKBP6O75344 327 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 AQP5P55064 265 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 IFI35P80217 286 aaPredicted RBP17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 C2CD6Q53TS8 623 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 FAXCQ5TGI0 409 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 TRIM62Q9BVG3 475 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 GID8Q9NWU2 228 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 M0R3G1 203 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 TMCC1O94876 653 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 NR3C2P08235 984 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 CACNA2D1P54289 1103 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 PRKCEQ02156 737 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 ADRM1Q16186 407 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 TFDP3Q5H9I0 405 aa17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 YTHDF3Q7Z739 585 aaKnown RBP17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 PRPF18Q99633 342 aaKnown RBP17.85■□□□□ 0.45
PTP4A1-201ENST00000370651 QTRT2Q9H974 415 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms