RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ABHD16BQ9H3Z7 469 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 TSPY26PQ9H489 355 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 MAGEF1Q9HAY2 307 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 RC3H2Q9HBD1 1191 aaKnown RBP3.92□□□□□ -1.78
MCF2-202ENST00000370573 POLD4Q9HCU8 107 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 ATP13A1Q9HD20 1204 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 DNM3Q9UQ16 869 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 KDM3AQ9Y4C1 1321 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 THSD7BQ9C0I4 1608 aa3.92□□□□□ -1.78
MCF2-202ENST00000370573 CCDC163A0A0D9SF12 145 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 CHURC1-FNTBB4DL54 471 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 TNFRSF10CO14798 259 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 CST3P01034 146 aaPredicted RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 CAPNS1P04632 268 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 RPN1P04843 607 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 C6orf222P0C671 652 aaPredicted RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 CCDC192P0DO97 292 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 CYP11B2P19099 503 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 NPEPPSP55786 919 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 PSMC5P62195 406 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 ZP2Q05996 745 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 GIT2Q14161 759 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 DPCR1Q3MIW9 517 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 HSDL1Q3SXM5 330 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 DUSP28Q4G0W2 176 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 ANO6Q4KMQ2 910 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 ZC3H12BQ5HYM0 836 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 IQSEC1Q6DN90 963 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 RINT1Q6NUQ1 792 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 MIS18BP1Q6P0N0 1132 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 C1orf186Q6ZWK4 172 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 PPFIBP1Q86W92 1011 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 GPBP1Q86WP2 473 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 C4orf19Q8IY42 314 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SMAP1Q8IYB5 467 aaPredicted RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 GIMAP8Q8ND71 665 aaPredicted RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 NEK9Q8TD19 979 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SOCS4Q8WXH5 440 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SEPT1Q8WYJ6 367 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 TRIB2Q92519 343 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 HPS3Q969F9 1004 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 TIFAQ96CG3 184 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SPATA33Q96N06 139 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SH2D3AQ9BRG2 576 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 EPN3Q9H201 632 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 BHMT2Q9H2M3 363 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 MLXIPQ9HAP2 919 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 AASDHPPTQ9NRN7 309 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 APEX2Q9UBZ4 518 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 TRHDEQ9UKU6 1024 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 ZHX1Q9UKY1 873 aaPredicted RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 IGSF9BQ9UPX0 1349 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 WASH4PA8MWX3 477 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 IFRD1O00458 451 aaPredicted RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 FKTNO75072 461 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SMC2O95347 1197 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 GH1P01241 217 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 XRCC6P12956 609 aaKnown RBP eCLIP3.91□□□□□ -1.78
MCF2-202ENST00000370573 YWHABP31946 246 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 TCF7P36402 384 aaPredicted RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 ASIC1P78348 528 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SLC7A5Q01650 507 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 KIF22Q14807 665 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 MLC1Q15049 377 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 STX1AQ16623 288 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SV2CQ496J9 727 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 FAM102BQ5T8I3 360 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 UTP14CQ5TAP6 766 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 CDCP2Q5VXM1 449 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 PLA2G4FQ68DD2 849 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 ANO5Q75V66 913 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 TRMT1LQ7Z2T5 733 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 TCEAL8Q8IYN2 117 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 MFSD4AQ8N468 514 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 AFG1LQ8WV93 481 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 ASB11Q8WXH4 323 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 GSDMAQ96QA5 445 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 MED15Q96RN5 788 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 FGFBP2Q9BYJ0 223 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 INTS7Q9NVH2 962 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 SAGE1Q9NXZ1 904 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SRRDQ9UH36 339 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 KLHL3Q9UH77 587 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 SFMBT1Q9UHJ3 866 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 HOOK1Q9UJC3 728 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 DBR1Q9UK59 544 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 GDAQ9Y2T3 454 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 TNPO3Q9Y5L0 923 aaKnown RBP3.91□□□□□ -1.78
MCF2-202ENST00000370573 HTTP42858 3142 aa3.91□□□□□ -1.78
MCF2-202ENST00000370573 PVALEFA0A1B0GWK0 134 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 FRMD3A2A2Y4 597 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 RSPH10B2B2RC85 870 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 RHOBTB3O94955 611 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 RSPH10BP0C881 870 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 CYBAP13498 195 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 RARRES1P49788 294 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 STAT5BP51692 787 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 PRKCEQ02156 737 aa3.9□□□□□ -1.78
MCF2-202ENST00000370573 TNFAIP2Q03169 654 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms