RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 KCTD21Q4G0X4 260 aa10.94□□□□□ -0.66
PRPF38B-201ENST00000370021 SEMA4DQ92854 862 aa10.94□□□□□ -0.66
PRPF38B-201ENST00000370021 KREMEN1Q96MU8 473 aa10.94□□□□□ -0.66
PRPF38B-201ENST00000370021 LRRC19Q9H756 370 aa10.94□□□□□ -0.66
PRPF38B-201ENST00000370021 CHCHD3Q9NX63 227 aaKnown RBP10.94□□□□□ -0.66
PRPF38B-201ENST00000370021 PCDHAC2Q9Y5I4 1007 aa10.94□□□□□ -0.66
PRPF38B-201ENST00000370021 LRP5O75197 1615 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 PIK3CDO00329 1044 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 OR6B1O95007 311 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 TPP2P29144 1249 aaPredicted RBP10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 ATP11CQ8NB49 1132 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 TXNDC16Q9P2K2 825 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 XPO7Q9UIA9 1087 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 LNPEPQ9UIQ6 1025 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 GRID1Q9ULK0 1009 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 DCCP43146 1447 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 WDR64B1ANS9 1081 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 CYB561D2O14569 222 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 MEIS2O14770 477 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 CST8O60676 142 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 ALADP13716 330 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 CCNB1P14635 433 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 GNAZP19086 355 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 GNA15P30679 374 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 LIG4P49917 911 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 LMNB2Q03252 620 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 ORC1Q13415 861 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 SLC45A4Q5BKX6 768 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 SPDYCQ5MJ68 293 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 C1orf228Q6PIY5 440 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 POLNQ7Z5Q5 900 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 NME8Q8N427 588 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 ETNPPLQ8TBG4 499 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 NRG4Q8WWG1 115 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 TEKT1Q969V4 418 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 TRIM56Q9BRZ2 755 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 CCDC134Q9H6E4 229 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 TMEM206Q9H813 350 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 BCORQ6W2J9 1755 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 TCP10L2B9ZVM9 353 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 AVILO75366 819 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 NDUFB10O96000 172 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 GSTA2P09210 222 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 RPL7AP62424 266 aaKnown RBP10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 FAAP100Q0VG06 881 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 PLEKHG4Q58EX7 1191 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 ZNF513Q8N8E2 541 aaPredicted RBP10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 KCTD6Q8NC69 237 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 FBXO27Q8NI29 283 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 PTPRN2Q92932 1015 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 FAF2Q96CS3 445 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 OXNAD1Q96HP4 312 aaPredicted RBP10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 KCNMB3Q9NPA1 279 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 ACSS2Q9NR19 701 aa10.93□□□□□ -0.66
PRPF38B-201ENST00000370021 IQANK1A0A1B0GTG1 560 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 CLRN2A0PK11 232 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 GTPBP10A4D1E9 387 aaKnown RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 F8VP50 259 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 NEMP1O14524 444 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 AIM2O14862 343 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 NPTXRO95502 500 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 ANPEPP15144 967 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 SOX11P35716 441 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 INHBEP58166 350 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 ZNF200P98182 395 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 PDE1BQ01064 536 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 CNPY1Q3B7I2 92 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 SATL1Q86VE3 508 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 TRIML2Q8N7C3 387 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 ICA1LQ8NDH6 482 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 RBM15BQ8NDT2 890 aaKnown RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 TTC25Q96NG3 672 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 GRIP2Q9C0E4 1043 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 ASCC2Q9H1I8 757 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 DNAJC5Q9H3Z4 198 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 EBF3Q9H4W6 596 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 MRPL47Q9HD33 250 aaKnown RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 IVNS1ABPQ9Y6Y0 642 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 GPR75-ASB3A0A0A6YYF3 556 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 LRRIQ4A6NIV6 560 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 TCF4P15884 667 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 DMP1Q13316 513 aaPredicted RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 PTK6Q13882 451 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 TRAPPC3LQ5T215 181 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 MTHFD1LQ6UB35 978 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 LINC00116Q8NCU8 138 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 C10orf82Q8WW14 230 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 CEP170P1Q96L14 293 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 PRKAG3Q9UGI9 489 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 MTO1Q9Y2Z2 717 aaKnown RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 BCL9LQ86UU0 1499 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 MYOCOSA0A1B0GUC4 107 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 FSCN2O14926 492 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 CSDE1O75534 798 aaKnown RBP10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 WEE2P0C1S8 567 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 DESP17661 470 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 PSMA2P25787 234 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 DENND5BQ6ZUT9 1274 aa10.92□□□□□ -0.66
PRPF38B-201ENST00000370021 SV2AQ7L0J3 742 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms