RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GOLPH3Q9H4A6 298 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 RERGLQ9H628 205 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 RPAP3Q9H6T3 665 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 STRNO43815 780 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 PDE5AO76074 875 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 TDP2O95551 362 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 ITGAXP20702 1163 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 HPS3Q969F9 1004 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 XPO6Q96QU8 1125 aaKnown RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 FAM153AQ9UHL3 310 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 SPAG6O75602 509 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 SERPINB5P36952 375 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 FMO5P49326 533 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 RNF149Q8NC42 400 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 CPDO75976 1380 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 H2AFYO75367 372 aaKnown RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 GRAP2O75791 330 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 PSMC3P17980 439 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 POU4F1Q01851 419 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 NCOA4Q13772 614 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 SLC44A5Q8NCS7 719 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 SLC40A1Q9NP59 571 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 RNF146Q9NTX7 359 aa12.97□□□□□ -0.33
HCFC1-202ENST00000369984 PIN4Q9Y237 131 aaKnown RBP12.97□□□□□ -0.33
HCFC1-202ENST00000369984 RAD51CO43502 376 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 MAGEA4P43358 317 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ACOT2P49753 483 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 EFNA5P52803 228 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ZCWPW2Q504Y3 356 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 PPP2R3CQ969Q6 453 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 C9orf72Q96LT7 481 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 RBBP8Q99708 897 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 RIC8BQ9NVN3 520 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ANKRD12Q6UB98 2062 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 MYH3P11055 1940 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 TRPC5OSA6NMA1 111 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ARMCX4Q5H9R4 360 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 PDZK1P1A8MUH7 402 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 GEMIN4P57678 1058 aaKnown RBP12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ST8SIA6P61647 398 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 SLC25A41Q8N5S1 370 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 PAK5Q9P286 719 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 DOLKQ9UPQ8 538 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 PDXKO00764 312 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 CHI3L1P36222 383 aaPredicted RBP12.96□□□□□ -0.33
HCFC1-202ENST00000369984 GALCP54803 685 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 MROH9Q5TGP6 573 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 OTOAQ7RTW8 1153 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 OR8H2Q8N162 312 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 TRIM63Q969Q1 353 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ROPN1BQ9BZX4 212 aaPredicted RBP12.96□□□□□ -0.33
HCFC1-202ENST00000369984 CATSPERBQ9H7T0 1116 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 ROPN1Q9HAT0 212 aaPredicted RBP12.96□□□□□ -0.33
HCFC1-202ENST00000369984 NRKQ7Z2Y5 1582 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 CPA2P48052 419 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 NCF4Q15080 339 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.337e-6■■■■■ 33.2
HCFC1-202ENST00000369984 CENPTQ96BT3 561 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 MBD2Q9UBB5 411 aa12.96□□□□□ -0.33
HCFC1-202ENST00000369984 MYO18AQ92614 2054 aaKnown RBP12.96□□□□□ -0.34
HCFC1-202ENST00000369984 FOXN1O15353 648 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 TADA2AO75478 443 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 PDGFRAP16234 1089 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 C19orf18Q8NEA5 215 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 FAM118BQ9BPY3 351 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 MYLK2Q9H1R3 596 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 PDGFRBP09619 1106 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.34
HCFC1-202ENST00000369984 IPMKQ8NFU5 416 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 TIPINQ9BVW5 301 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 AGPAT5Q9NUQ2 364 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 IL1RAPL1Q9NZN1 696 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 PDP2Q9P2J9 529 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 WDR35Q9P2L0 1181 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 SLC30A1Q9Y6M5 507 aa12.96□□□□□ -0.34
HCFC1-202ENST00000369984 IRF1P10914 325 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 ITGA8P53708 1063 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 GPSM2P81274 684 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 PTK6Q13882 451 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 MROH7-TTC4A0A0A0MT08 1334 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 CLEC16AQ2KHT3 1053 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 FAM83EQ2M2I3 478 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 GALNTL6Q49A17 601 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 ZRANB3Q5FWF4 1079 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 C11orf88Q6PI97 169 aa12.95□□□□□ -0.34
HCFC1-202ENST00000369984 CCNI2Q6ZMN8 369 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 THUMPD3Q9BV44 507 aaKnown RBP12.95□□□□□ -0.34
HCFC1-202ENST00000369984 MRPL39Q9NYK5 338 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms