RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 LRRC23Q53EV4 343 aaPredicted RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 HIST2H2AA3Q6FI13 130 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 DTX3LQ8TDB6 740 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 ZNF669Q96BR6 464 aaPredicted RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 WDCPQ9H6R7 721 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 TMEM8AQ9HCN3 771 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 AIM2O14862 343 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 AP1G2O75843 785 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 ALOX15P16050 662 aaPredicted RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 HNRNPH2P55795 449 aaKnown RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 GRIN1Q05586 938 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 C7orf25Q9BPX7 421 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 WWOXQ9NZC7 414 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 ARHGEF9O43307 516 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 KDM1AO60341 852 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 TCF3P15923 654 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 PTGER2P43116 358 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 PLA2G4AP47712 749 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 POU4F1Q01851 419 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 FAM71DQ8N9W8 422 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 OSBPL8Q9BZF1 889 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 OLFML3Q9NRN5 406 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 SRP72O76094 671 aaKnown RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 DARSP14868 501 aaKnown RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 PLIN5Q00G26 463 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 CDC16Q13042 620 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 PHKG1Q16816 387 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 CYGBQ8WWM9 190 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 MRPS31Q92665 395 aaKnown RBP11.77□□□□□ -0.53
PDCD11-201ENST00000369797 FBXO32Q969P5 355 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 PAK5Q9P286 719 aa11.77□□□□□ -0.53
PDCD11-201ENST00000369797 MAP3K6O95382 1288 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 GJB7Q6PEY0 223 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 C3orf62Q6ZUJ4 267 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 SYDE1Q6ZW31 735 aaPredicted RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 ZNF614Q8N883 585 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 PAWRQ96IZ0 340 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 OSBPL1AQ9BXW6 950 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 YIPF3Q9GZM5 350 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 CDYLQ9Y232 598 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 PCDHB2Q9Y5E7 798 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 COMTP21964 271 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 TP53BP2Q13625 1128 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 BTNL9Q6UXG8 535 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 SPATA21Q7Z572 469 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 HORMAD1Q86X24 394 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 C1orf131Q8NDD1 294 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 STN1Q9H668 368 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 SMARCAL1Q9NZC9 954 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 GPR182O15218 404 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 NDUFB5O43674 189 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 ADCY3O60266 1144 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 CLCN3P51790 818 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 FMR1Q06787 632 aaKnown RBP eCLIP11.76□□□□□ -0.534e-6■■■□□ 19.2
PDCD11-201ENST00000369797 FAXCQ5TGI0 409 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 C9orf131Q5VYM1 1079 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 ZNF34Q8IZ26 560 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 ADSSL1Q8N142 457 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 UCMAQ8WVF2 138 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 RSAD1Q9HA92 442 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 KCND2Q9NZV8 630 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 PSMC3IPQ9P2W1 217 aaPredicted RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 WDR47O94967 919 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 FAM107AO95990 144 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 VTNP04004 478 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 AVPR1AP37288 418 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 SERPINB9P50453 376 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 STYK1Q6J9G0 422 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 PLEKHH3Q7Z736 793 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 KAT2BQ92831 832 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 IRX2Q9BZI1 471 aaPredicted RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 SHCBP1LQ9BZQ2 653 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 CPA4Q9UI42 421 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 F5H5T6 163 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 TRIM16O95361 564 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 RBP3P10745 1247 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 PNPLA4P41247 253 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 CARSP49589 748 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 PTK6Q13882 451 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 FAM180AQ6UWF9 173 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 FBXO16Q8IX29 292 aaPredicted RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 FAM136AQ96C01 138 aa11.76□□□□□ -0.53
PDCD11-201ENST00000369797 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
PDCD11-201ENST00000369797 NCF1BA6NI72 391 aaPredicted RBP11.75□□□□□ -0.53
PDCD11-201ENST00000369797 NCF1CA8MVU1 366 aaPredicted RBP11.75□□□□□ -0.53
PDCD11-201ENST00000369797 H2AFYO75367 372 aaKnown RBP11.75□□□□□ -0.53
PDCD11-201ENST00000369797 MLNP12872 115 aa11.75□□□□□ -0.53
PDCD11-201ENST00000369797 NCF1P14598 390 aaPredicted RBP11.75□□□□□ -0.53
PDCD11-201ENST00000369797 SLC44A2Q8IWA5 706 aaPredicted RBP11.75□□□□□ -0.53
PDCD11-201ENST00000369797 DIS3LQ8TF46 1054 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms