RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 MICAL2O94851 1124 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 CLSTN1O94985 981 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 SEC24AO95486 1093 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 FGFR1OPO95684 399 aaKnown RBP19.83■□□□□ 0.77
CHTOP-202ENST00000368687 CST3P01034 146 aaPredicted RBP19.83■□□□□ 0.77
CHTOP-202ENST00000368687 OR4Q2P0C623 313 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 MYL6P60660 151 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 PAK1Q13153 545 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 ZNF667Q5HYK9 610 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 INTS6LQ5JSJ4 861 aaKnown RBP19.83■□□□□ 0.77
CHTOP-202ENST00000368687 SV2AQ7L0J3 742 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 GRASPQ7Z6J2 395 aaPredicted RBP19.83■□□□□ 0.77
CHTOP-202ENST00000368687 ITIH5Q86UX2 942 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 FAM84AQ96KN4 292 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 PGLYRP2Q96PD5 576 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 XYLT2Q9H1B5 865 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 TMEM8AQ9HCN3 771 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 EPS15L1Q9UBC2 864 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 RAPGEFL1Q9UHV5 662 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 CDH9Q9ULB4 789 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 PCDHB5Q9Y5E4 795 aa19.83■□□□□ 0.77
CHTOP-202ENST00000368687 FGF19O95750 216 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 TRIM21P19474 475 aaKnown RBP19.82■□□□□ 0.76
CHTOP-202ENST00000368687 GBP2P32456 591 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-202ENST00000368687 PIK3CAP42336 1068 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 DLG4P78352 724 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 TWF1Q12792 350 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 DUSP4Q13115 394 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 VEPH1Q14D04 833 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 CAMK4Q16566 473 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 CYP4A22Q5TCH4 519 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 KRT39Q6A163 491 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 C4orf50Q6ZRC1 276 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 FEZF2Q8TBJ5 459 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 FUBP3Q96I24 572 aaKnown RBP eCLIP19.82■□□□□ 0.76
CHTOP-202ENST00000368687 FAXDC2Q96IV6 333 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 LRFN3Q9BTN0 628 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 DNAI2Q9GZS0 605 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 NUP62CLQ9H1M0 184 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 SNX25Q9H3E2 840 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 LMBRD1Q9NUN5 540 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 IGSF9Q9P2J2 1179 aa19.82■□□□□ 0.76
CHTOP-202ENST00000368687 ARMCX3Q9UH62 379 aaPredicted RBP19.82■□□□□ 0.76
CHTOP-202ENST00000368687 BIN1O00499 593 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 GNA14O95837 355 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 RHOP08100 348 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 COL9A1P20849 921 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 SP100P23497 879 aaPredicted RBP19.81■□□□□ 0.76
CHTOP-202ENST00000368687 TMEM31Q5JXX7 168 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 ISM2Q6H9L7 571 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 KLHL10Q6JEL2 608 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 PDZD4Q76G19 769 aaPredicted RBP19.81■□□□□ 0.76
CHTOP-202ENST00000368687 GET4Q7L5D6 327 aaPredicted RBP19.81■□□□□ 0.76
CHTOP-202ENST00000368687 MLKLQ8NB16 471 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 ATAD1Q8NBU5 361 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 NELFBQ8WX92 580 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 ASAH2Q9NR71 780 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 DNMT3BQ9UBC3 853 aaKnown RBP19.81■□□□□ 0.76
CHTOP-202ENST00000368687 MUTYHQ9UIF7 546 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 DOCK6Q96HP0 2047 aa19.81■□□□□ 0.76
CHTOP-202ENST00000368687 PPP1R3GB7ZBB8 358 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 GPR37L1O60883 481 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 ASS1P00966 412 aaKnown RBP19.8■□□□□ 0.76
CHTOP-202ENST00000368687 BMP6P22004 513 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 GNL1P36915 607 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-202ENST00000368687 MXI1P50539 228 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 MTMR3Q13615 1198 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 PTPN21Q16825 1174 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 MGAT5BQ3V5L5 792 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 CFAP221Q4G0U5 840 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 TTI2Q6NXR4 508 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 FRMD5Q7Z6J6 570 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 FILIP1Q7Z7B0 1213 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 UBALD2Q8IYN6 164 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 KBTBD7Q8WVZ9 684 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 CEP295NLQ96MC4 621 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 TMEM209Q96SK2 561 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 FAM124BQ9H5Z6 455 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-202ENST00000368687 ABI2Q9NYB9 513 aaPredicted RBP19.8■□□□□ 0.76
CHTOP-202ENST00000368687 GDE1Q9NZC3 331 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 NXF1Q9UBU9 619 aaKnown RBP19.8■□□□□ 0.76
CHTOP-202ENST00000368687 DACH1Q9UI36 760 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 CDH7Q9ULB5 785 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 SORCS3Q9UPU3 1222 aa19.8■□□□□ 0.76
CHTOP-202ENST00000368687 MRPS23Q9Y3D9 190 aaKnown RBP19.8■□□□□ 0.76
CHTOP-202ENST00000368687 TRIM49BA6NDI0 452 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 VNN1O95497 513 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 VNN2O95498 520 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 MBD3O95983 291 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 HLA-DRAP01903 254 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 TRIM49P0CI25 452 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 TRIM49CP0CI26 452 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 LAMP2P13473 410 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 CD44P16070 742 aaKnown RBP19.79■□□□□ 0.76
CHTOP-202ENST00000368687 GCLMP48507 274 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 PMS1P54277 932 aaKnown RBP19.79■□□□□ 0.76
CHTOP-202ENST00000368687 EPHA5P54756 1037 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 RPL10AP62906 217 aaKnown RBP19.79■□□□□ 0.76
CHTOP-202ENST00000368687 C1orf220Q5T0J3 134 aa19.79■□□□□ 0.76
CHTOP-202ENST00000368687 FAM171BQ6P995 826 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms