RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PASD1Q8IV76 773 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 ALLCQ8N6M5 410 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 ARHGEF2Q92974 986 aaKnown RBP10.79□□□□□ -0.68
TPM3-209ENST00000368527 SGSM3Q96HU1 749 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 ZNF317Q96PQ6 595 aaPredicted RBP10.79□□□□□ -0.68
TPM3-209ENST00000368527 MTMR12Q9C0I1 747 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 XYLT2Q9H1B5 865 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 IFT122Q9HBG6 1241 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 NKIRAS1Q9NYS0 192 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 CHORDC1Q9UHD1 332 aaPredicted RBP10.79□□□□□ -0.68
TPM3-209ENST00000368527 SLC24A2Q9UI40 661 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 ITGA11Q9UKX5 1188 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 TPX2Q9ULW0 747 aaKnown RBP10.79□□□□□ -0.68
TPM3-209ENST00000368527 ZNF148Q9UQR1 794 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 SLC45A1Q9Y2W3 748 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 DERAQ9Y315 318 aa10.79□□□□□ -0.68
TPM3-209ENST00000368527 hCG_1818297A0A087WSY0 165 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 O00370 1275 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
TPM3-209ENST00000368527 CNMDO75829 334 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 TOMM70O94826 608 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 GH1P01241 217 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 SETSIPP0DME0 302 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 VDRP11473 427 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 KRT3P12035 628 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 HARSP12081 509 aaKnown RBP10.78□□□□□ -0.68
TPM3-209ENST00000368527 ASPAP45381 313 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 GABRB2P47870 512 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 TAS2R40P59535 323 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 IFT88Q13099 833 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 CBLBQ13191 982 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 CNGA2Q16280 664 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 TAZQ16635 292 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 ZBTB41Q5SVQ8 909 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 ZFYVE27Q5T4F4 411 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 PRAMEF18Q5VWM3 479 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 C4orf22Q6V702 233 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 BBS12Q6ZW61 710 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 USP50Q70EL3 339 aaPredicted RBP10.78□□□□□ -0.68
TPM3-209ENST00000368527 CENPUQ71F23 418 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 ZBTB33Q86T24 672 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 RHPN2Q8IUC4 686 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 DYDC1Q8WWB3 177 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 MCEEQ96PE7 176 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 SSU72Q9NP77 194 aaKnown RBP10.78□□□□□ -0.68
TPM3-209ENST00000368527 AAASQ9NRG9 546 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 ASNSD1Q9NWL6 643 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 NINJ2Q9NZG7 142 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 SMG5Q9UPR3 1016 aaKnown RBP10.78□□□□□ -0.68
TPM3-209ENST00000368527 USTQ9Y2C2 406 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 C2CD2Q9Y426 696 aa10.78□□□□□ -0.68
TPM3-209ENST00000368527 RBM47A0AV96 593 aaKnown RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 ZNF487B1APH4 448 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 ZBTB42B2RXF5 422 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 INO80B-WBP1J3KQ70 363 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 STRNO43815 780 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 SPAG6O75602 509 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 RNF8O76064 485 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 SUN1O94901 812 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 CST3P01034 146 aaPredicted RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 TXNP10599 105 aaKnown RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 ATP2A2P16615 1042 aaKnown RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 CD58P19256 250 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 BRD2P25440 801 aaKnown RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 PSMA2P25787 234 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 PCK1P35558 622 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 CDKN2BP42772 138 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 MAGEA4P43358 317 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 LIG3P49916 1009 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 WNT7BP56706 349 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 MBTD1Q05BQ5 628 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 IRF5Q13568 498 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 TFDP2Q14188 446 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 LY6KQ17RY6 165 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 DCAF4L1Q3SXM0 396 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 ZC3H12AQ5D1E8 599 aaKnown RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 FAM47CQ5HY64 1035 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 EFCAB12Q6NXP0 572 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 PAXIP1Q6ZW49 1069 aaPredicted RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 EXOC3L1Q86VI1 746 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 ZNF410Q86VK4 478 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 SUGP1Q8IWZ8 645 aaKnown RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 EPS8L3Q8TE67 593 aaKnown RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 ATG4AQ8WYN0 398 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 FAM212AQ96EL1 285 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 RBM15Q96T37 977 aaKnown RBP eCLIP10.77□□□□□ -0.69
TPM3-209ENST00000368527 ADPGKQ9BRR6 497 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 HEMGNQ9BXL5 484 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 TRIM7Q9C029 511 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 INO80BQ9C086 356 aaPredicted RBP10.77□□□□□ -0.69
TPM3-209ENST00000368527 CDT1Q9H211 546 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 ADAM7Q9H2U9 754 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 SYNCQ9H7C4 482 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 RSAD1Q9HA92 442 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 PRDM16Q9HAZ2 1276 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 TELO2Q9Y4R8 837 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 PTPRFP10586 1907 aa10.77□□□□□ -0.69
TPM3-209ENST00000368527 ZNFX1Q9P2E3 1918 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms