RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 HSPA6P17066 643 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 TAC1P20366 129 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 BMPR2Q13873 1038 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 PGM5Q15124 567 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ANKRD20A2Q5SQ80 823 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ANKRD20A1Q5TYW2 823 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ANKRD20A3Q5VUR7 823 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 DNAJC24Q6P3W2 148 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 RFWD3Q6PCD5 774 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 PYROXD1Q8WU10 500 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ATXN7L3BQ96GX2 97 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 FAXDC2Q96IV6 333 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 NLRP4Q96MN2 994 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 RPS6KC1Q96S38 1066 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 OSBPL1AQ9BXW6 950 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 MAK16Q9BXY0 300 aaKnown RBP9.35□□□□□ -0.91
THBS3-201ENST00000368378 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
THBS3-201ENST00000368378 EXOC7Q9UPT5 735 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 MYO18AQ92614 2054 aaKnown RBP9.35□□□□□ -0.91
THBS3-201ENST00000368378 COL11A2P13942 1736 aaPredicted RBP9.35□□□□□ -0.91
THBS3-201ENST00000368378 ATRNL1Q5VV63 1379 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 DCAF8L1A6NGE4 600 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 CST8O60676 142 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 DDNO94850 711 aaPredicted RBP9.35□□□□□ -0.91
THBS3-201ENST00000368378 BAG2O95816 211 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 POTEJP0CG39 1038 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 FGFR1P11362 822 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ITIH2P19823 946 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 GMPRP36959 345 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 KDSRQ06136 332 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 C9orf131Q5VYM1 1079 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 STYK1Q6J9G0 422 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 B3GNT9Q6UX72 402 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 RSAD2Q8WXG1 361 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 CD101Q93033 1021 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 FAM111AQ96PZ2 611 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 DDX50Q9BQ39 737 aaKnown RBP9.35□□□□□ -0.91
THBS3-201ENST00000368378 IL1RAPL1Q9NZN1 696 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 PACSIN3Q9UKS6 424 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 SLC12A4Q9UP95 1085 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 C15orf41Q9Y2V0 281 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 IKBKGQ9Y6K9 419 aa9.35□□□□□ -0.91
THBS3-201ENST00000368378 ATP8B3O60423 1300 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 CCDC78A2IDD5 438 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 NFKBIEO00221 500 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 DNAJC8O75937 253 aaPredicted RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 NR3C2P08235 984 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 ATXN3P54252 364 aaPredicted RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 MAMLD1Q13495 774 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 C11orf91Q3C1V1 193 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 ZCCHC23Q6ZST2 131 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 TRMT10CQ7L0Y3 403 aaKnown RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 FAM160B2Q86V87 743 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 RFX6Q8HWS3 928 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 RHOT1Q8IXI2 618 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 ANKRD35Q8N283 1001 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 RFWD2Q8NHY2 731 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 FAM151AQ8WW52 585 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 CKAP2Q8WWK9 683 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 PGLYRP2Q96PD5 576 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 CEP41Q9BYV8 373 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 IMPG2Q9BZV3 1241 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.34□□□□□ -0.91
THBS3-201ENST00000368378 UVRAGQ9P2Y5 699 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 ZFP69BQ9UJL9 534 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 FEM1BQ9UK73 627 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 CHKBQ9Y259 395 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 MAD1L1Q9Y6D9 718 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 ZNF536O15090 1300 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 CYP1A2P05177 515 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 ICAM1P05362 532 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 GZMAP12544 262 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 PSMA2P25787 234 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 CETN2P41208 172 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 RGS7P49802 495 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 DRG2P55039 364 aaKnown RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 MYL6P60660 151 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 GTF2BQ00403 316 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 CNTN2Q02246 1040 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 MUM1Q2TAK8 710 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 PPP6R3Q5H9R7 873 aaPredicted RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 HACE1Q8IYU2 909 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 UBA3Q8TBC4 463 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 PDCD2LQ9BRP1 358 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 TRIM6Q9C030 488 aaPredicted RBP9.34□□□□□ -0.91
THBS3-201ENST00000368378 PCDHA10Q9Y5I2 948 aa9.34□□□□□ -0.91
THBS3-201ENST00000368378 SRRM3A6NNA2 597 aaPredicted RBP9.34□□□□□ -0.92
THBS3-201ENST00000368378 IVDP26440 423 aa9.34□□□□□ -0.92
THBS3-201ENST00000368378 ATP5DP30049 168 aa9.34□□□□□ -0.92
THBS3-201ENST00000368378 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.92
THBS3-201ENST00000368378 OTUD4Q01804 1114 aaKnown RBP9.34□□□□□ -0.92
THBS3-201ENST00000368378 OGDHQ02218 1023 aa9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms