RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 MAFO75444 373 aaPredicted RBP15.07■□□□□ 0
CD48-201ENST00000368045 ASMTLO95671 621 aa15.07■□□□□ 0
CD48-201ENST00000368045 PECAM1P16284 738 aaPredicted RBP15.07■□□□□ 0
CD48-201ENST00000368045 GCAP28676 217 aa15.07■□□□□ 0
CD48-201ENST00000368045 POLR2BP30876 1174 aaKnown RBP15.07■□□□□ 0
CD48-201ENST00000368045 GMPSP49915 693 aaPredicted RBP15.07■□□□□ 0
CD48-201ENST00000368045 SPARCL1Q14515 664 aa15.07■□□□□ 0
CD48-201ENST00000368045 ATP13A4Q4VNC1 1196 aa15.07■□□□□ 0
CD48-201ENST00000368045 NOL9Q5SY16 702 aaKnown RBP15.07■□□□□ 0
CD48-201ENST00000368045 CDCA2Q69YH5 1023 aaPredicted RBP15.07■□□□□ 0
CD48-201ENST00000368045 TBC1D1Q86TI0 1168 aaPredicted RBP15.07■□□□□ 0
CD48-201ENST00000368045 ERICH1Q86X53 443 aa15.07■□□□□ 0
CD48-201ENST00000368045 APOBEC3FQ8IUX4 373 aaKnown RBP15.07■□□□□ 0
CD48-201ENST00000368045 SLC35B2Q8TB61 432 aa15.07■□□□□ 0
CD48-201ENST00000368045 MYCBPQ99417 103 aaPredicted RBP15.07■□□□□ 0
CD48-201ENST00000368045 GEMIN8Q9NWZ8 242 aaKnown RBP15.07■□□□□ 0
CD48-201ENST00000368045 MCM8Q9UJA3 840 aa15.07■□□□□ 0
CD48-201ENST00000368045 F8VP50 259 aa15.06■□□□□ 0
CD48-201ENST00000368045 ATP5HO75947 161 aa15.06■□□□□ 0
CD48-201ENST00000368045 EDN1P05305 212 aa15.06■□□□□ 0
CD48-201ENST00000368045 ALADP13716 330 aa15.06■□□□□ 0
CD48-201ENST00000368045 SSTR3P32745 418 aaPredicted RBP15.06■□□□□ 0
CD48-201ENST00000368045 EN1Q05925 392 aaPredicted RBP15.06■□□□□ 0
CD48-201ENST00000368045 IER5Q5VY09 327 aa15.06■□□□□ 0
CD48-201ENST00000368045 CGB2Q6NT52 195 aa15.06■□□□□ 0
CD48-201ENST00000368045 GPAT2Q6NUI2 795 aa15.06■□□□□ 0
CD48-201ENST00000368045 FNIP1Q8TF40 1166 aa15.06■□□□□ 0
CD48-201ENST00000368045 TCP11Q8WWU5 503 aa15.06■□□□□ 0
CD48-201ENST00000368045 FAXDC2Q96IV6 333 aa15.06■□□□□ 0
CD48-201ENST00000368045 PITPNM3Q9BZ71 974 aa15.06■□□□□ 0
CD48-201ENST00000368045 LHX5Q9H2C1 402 aa15.06■□□□□ 0
CD48-201ENST00000368045 TRABDQ9H4I3 376 aa15.06■□□□□ 0
CD48-201ENST00000368045 MLXIPLQ9NP71 852 aa15.06■□□□□ 0
CD48-201ENST00000368045 KLHL11Q9NVR0 708 aa15.06■□□□□ 0
CD48-201ENST00000368045 KIAA1217Q5T5P2 1943 aa15.06■□□□□ 0
CD48-201ENST00000368045 MSCO60682 206 aa15.06■□□□□ 0
CD48-201ENST00000368045 CST3P01034 146 aaPredicted RBP15.06■□□□□ 0
CD48-201ENST00000368045 KRT7P08729 469 aa15.06■□□□□ 0
CD48-201ENST00000368045 TCF4P15884 667 aa15.06■□□□□ 0
CD48-201ENST00000368045 TSHRP16473 764 aa15.06■□□□□ 0
CD48-201ENST00000368045 UBA1P22314 1058 aaKnown RBP15.06■□□□□ 0
CD48-201ENST00000368045 BRD2P25440 801 aaKnown RBP15.06■□□□□ 0
CD48-201ENST00000368045 FOXN2P32314 431 aa15.06■□□□□ 0
CD48-201ENST00000368045 STAT5BP51692 787 aa15.06■□□□□ 0
CD48-201ENST00000368045 WDR4P57081 412 aaKnown RBP15.06■□□□□ 0
CD48-201ENST00000368045 MYL6P60660 151 aa15.06■□□□□ 0
CD48-201ENST00000368045 OGDHQ02218 1023 aa15.06■□□□□ 0
CD48-201ENST00000368045 SF3A3Q12874 501 aaKnown RBP eCLIP15.06■□□□□ 0
CD48-201ENST00000368045 TRPC3Q13507 836 aa15.06■□□□□ 0
CD48-201ENST00000368045 ZKSCAN8Q15776 578 aaPredicted RBP15.06■□□□□ 0
CD48-201ENST00000368045 DALRD3Q5D0E6 543 aaKnown RBP15.06■□□□□ 0
CD48-201ENST00000368045 ZC3H12AQ5D1E8 599 aaKnown RBP15.06■□□□□ 0
CD48-201ENST00000368045 SH3D19Q5HYK7 790 aa15.06■□□□□ 0
CD48-201ENST00000368045 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
CD48-201ENST00000368045 ZBTB8OSQ8IWT0 167 aa15.06■□□□□ 0
CD48-201ENST00000368045 FBF1Q8TES7 1133 aa15.06■□□□□ 0
CD48-201ENST00000368045 KLHL29Q96CT2 875 aa15.06■□□□□ 0
CD48-201ENST00000368045 SMC6Q96SB8 1091 aa15.06■□□□□ 0
CD48-201ENST00000368045 PCYT2Q99447 389 aa15.06■□□□□ 0
CD48-201ENST00000368045 ACO2Q99798 780 aaKnown RBP15.06■□□□□ 0
CD48-201ENST00000368045 C2orf40Q9H1Z8 148 aa15.06■□□□□ 0
CD48-201ENST00000368045 ARHGEF3Q9NR81 526 aa15.06■□□□□ 0
CD48-201ENST00000368045 PSMC3IPQ9P2W1 217 aaPredicted RBP15.06■□□□□ 0
CD48-201ENST00000368045 BAIAP2L1Q9UHR4 511 aa15.06■□□□□ 0
CD48-201ENST00000368045 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.06■□□□□ 0
CD48-201ENST00000368045 LOC285556D6RIA3 1793 aa15.05■□□□□ -0
CD48-201ENST00000368045 LRRD1A4D1F6 860 aa15.05■□□□□ -0
CD48-201ENST00000368045 FOXO6A8MYZ6 492 aa15.05■□□□□ -0
CD48-201ENST00000368045 MED7O43513 233 aa15.05■□□□□ -0
CD48-201ENST00000368045 FARP2O94887 1054 aaPredicted RBP15.05■□□□□ -0
CD48-201ENST00000368045 ZSCAN5DPP0CG00 497 aa15.05■□□□□ -0
CD48-201ENST00000368045 TGFB3P10600 412 aa15.05■□□□□ -0
CD48-201ENST00000368045 HARSP12081 509 aaKnown RBP15.05■□□□□ -0
CD48-201ENST00000368045 CCNB1P14635 433 aa15.05■□□□□ -0
CD48-201ENST00000368045 EDNRBP24530 442 aa15.05■□□□□ -0
CD48-201ENST00000368045 PHBP35232 272 aa15.05■□□□□ -0
CD48-201ENST00000368045 ALDH5A1P51649 535 aaPredicted RBP15.05■□□□□ -0
CD48-201ENST00000368045 MXD4Q14582 209 aaPredicted RBP15.05■□□□□ -0
CD48-201ENST00000368045 TAZQ16635 292 aa15.05■□□□□ -0
CD48-201ENST00000368045 PDK4Q16654 411 aa15.05■□□□□ -0
CD48-201ENST00000368045 HADHQ16836 314 aaKnown RBP15.05■□□□□ -0
CD48-201ENST00000368045 EFHC2Q5JST6 749 aa15.05■□□□□ -0
CD48-201ENST00000368045 BBS12Q6ZW61 710 aa15.05■□□□□ -0
CD48-201ENST00000368045 ASRGL1Q7L266 308 aa15.05■□□□□ -0
CD48-201ENST00000368045 PRUNE1Q86TP1 453 aa15.05■□□□□ -0
CD48-201ENST00000368045 PNMA8AQ86V59 439 aaPredicted RBP15.05■□□□□ -0
CD48-201ENST00000368045 CEP57Q86XR8 500 aa15.05■□□□□ -0
CD48-201ENST00000368045 THNSL1Q8IYQ7 743 aa15.05■□□□□ -0
CD48-201ENST00000368045 FITM2Q8N6M3 262 aa15.05■□□□□ -0
CD48-201ENST00000368045 GLIS1Q8NBF1 620 aa15.05■□□□□ -0
CD48-201ENST00000368045 PRCCQ92733 491 aaPredicted RBP15.05■□□□□ -0
CD48-201ENST00000368045 MTMR12Q9C0I1 747 aa15.05■□□□□ -0
CD48-201ENST00000368045 VPS37BQ9H9H4 285 aa15.05■□□□□ -0
CD48-201ENST00000368045 TXLNGQ9NUQ3 528 aa15.05■□□□□ -0
CD48-201ENST00000368045 WDR35Q9P2L0 1181 aa15.05■□□□□ -0
CD48-201ENST00000368045 CPSF3Q9UKF6 684 aaKnown RBP15.05■□□□□ -0
CD48-201ENST00000368045 COL11A1P12107 1806 aaPredicted RBP15.05■□□□□ -0
CD48-201ENST00000368045 C3orf70A6NLC5 250 aaPredicted RBP15.04■□□□□ -0
CD48-201ENST00000368045 SIGLEC16A6NMB1 481 aa15.04■□□□□ -0
CD48-201ENST00000368045 SGK1O00141 431 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms