RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 C1DQ13901 141 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PTPRNQ16849 979 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CCDC105Q8IYK2 499 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PCDHGC5Q9Y5F6 944 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 HARS2P49590 506 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SCNN1DP51172 638 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 LACTB2Q53H82 288 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PSTKQ8IV42 348 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TGS1Q96RS0 853 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 LRRC53A6NM62 1247 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SLC26A3P40879 764 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CASP2P42575 452 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MYBPC3Q14896 1274 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CYS1Q717R9 158 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PTAR1Q7Z6K3 402 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SATL1Q86VE3 508 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SLC22A9Q8IVM8 553 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SRFBP1Q8NEF9 429 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ELMO1Q92556 727 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MEIS3Q99687 375 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 DYRK4Q9NR20 520 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FADS2P1A8MWK0 482 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RNF113AO15541 343 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CXCR5P32302 372 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 GDPD5Q8WTR4 605 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PPWD1Q96BP3 646 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CDK5RAP1Q96SZ6 601 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ARMC7Q9H6L4 198 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 EVLQ9UI08 416 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ATG4BQ9Y4P1 393 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 BBIP1A8MTZ0 92 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PRMT5O14744 637 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PDGFRAP16234 1089 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 COQ5Q5HYK3 327 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CLVS2Q5SYC1 327 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CCNI2Q6ZMN8 369 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ZBTB18Q99592 522 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ACTR6Q9GZN1 396 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SPTLC1O15269 473 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 HSPA1LP34931 641 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RPL3P39023 403 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PTGES3Q15185 160 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FAM91A1Q658Y4 838 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RASSF3Q86WH2 238 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FAM47BQ8NA70 645 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 KDM1BQ8NB78 822 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FNIP1Q8TF40 1166 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RPRD1BQ9NQG5 326 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CCDC59Q9P031 241 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 XPO7Q9UIA9 1087 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 GPC6Q9Y625 555 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 METP08581 1390 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FAM205AQ6ZU69 1335 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PTPREP23469 700 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ATP2B4P23634 1241 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 KIAA0408Q6ZU52 694 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 Q96MT0 163 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 DEPDC4Q8N2C3 294 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CINPQ9BW66 212 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SLC2A11Q9BYW1 496 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 UNC5CO95185 931 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PTGER2P43116 358 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RESP18Q5W5W9 173 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RFT1Q96AA3 541 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 INTS2Q9H0H0 1204 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PIGUQ9H490 435 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RCOR3Q9P2K3 495 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 EMILIN1Q9Y6C2 1016 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SPOPO43791 374 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 MAGEC1O60732 1142 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 PRDM1O75626 825 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 APOL3O95236 402 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 TRIP13Q15645 432 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 RSRC2Q7L4I2 434 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 FAM167BQ9BTA0 163 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 SMARCAD1Q9H4L7 1026 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 RNPEPL1Q9HAU8 725 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 MALT1Q9UDY8 824 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 DNPEPQ9ULA0 475 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 KLF11O14901 512 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 TYK2P29597 1187 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 GNA13Q14344 377 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 KRT33BQ14525 404 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 RFTN1Q14699 578 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 EFHC2Q5JST6 749 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 MARK2Q7KZI7 788 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 SPAG16Q8N0X2 631 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 ZBTB7BO15156 539 aaPredicted RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 INHBAP08476 426 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 SAMD4BQ5PRF9 694 aaKnown RBP3.91□□□□□ -1.78
SYNE1-207ENST00000367255 FAM160B1Q5W0V3 765 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 LINC00523Q86TU6 105 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 TDRPQ86YL5 185 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 NATD1Q8N6N6 113 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 LRRIQ4A6NIV6 560 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 ISLR2Q6UXK2 745 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 TPTE2Q6XPS3 522 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 HAVCR1Q96D42 359 aa3.91□□□□□ -1.78
SYNE1-207ENST00000367255 TUBE1Q9UJT0 475 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms