RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 HLA-DOAP06340 250 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 GATA3P23771 443 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 DDX6P26196 483 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 BMPR1AP36894 532 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZNF134P52741 427 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 MXRA7P84157 204 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 FPGSQ05932 587 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZNF543Q08ER8 600 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 LONRF1Q17RB8 773 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 LONRF3Q496Y0 759 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 TIGD2Q4W5G0 525 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 IGFL4Q6B9Z1 124 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 CLNKQ7Z7G1 428 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 OR56A3Q8NH54 315 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 RAPGEF4Q8WZA2 1011 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 HAS1Q92839 578 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 TMEM125Q96AQ2 219 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 TRIM43Q96BQ3 446 aaPredicted RBP5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 UNKLQ9H9P5 680 aaKnown RBP5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 GALNT9Q9HCQ5 603 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 TMEM74BQ9NUR3 256 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 AFF4Q9UHB7 1163 aaKnown RBP5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 REXO2Q9Y3B8 237 aaKnown RBP5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 RAD54BQ9Y620 910 aa5.27□□□□□ -1.57
RNU6-560P-201ENST00000364007 FNDC1Q4ZHG4 1894 aaPredicted RBP5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 MYO1CO00159 1063 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 PEX11BO96011 259 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 GCLCP48506 637 aaPredicted RBP5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 ANXA11P50995 505 aaKnown RBP5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 ALDH5A1P51649 535 aaPredicted RBP5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 CASP5P51878 434 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 LILRA4P59901 499 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 RAB32Q13637 225 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 DCAF12L1Q5VU92 463 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZDHHC24Q6UX98 284 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 GPR149Q86SP6 731 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 SKAP1Q86WV1 359 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZNF280BQ86YH2 543 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 LIX1LQ8IVB5 337 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 ADGRG5Q8IZF4 528 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZNF747Q9BV97 191 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 MLST8Q9BVC4 326 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 STK31Q9BXU1 1019 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZNF518BQ9C0D4 1074 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 MS4A7Q9GZW8 240 aaPredicted RBP5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 MMRN2Q9H8L6 949 aa5.26□□□□□ -1.57
RNU6-560P-201ENST00000364007 MYADML2A6NDP7 307 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 POM121BA6NF01 834 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 E7ENX8 843 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 F5H697 171 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 PYCARD-AS1I3L0S3 204 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 FOSP01100 380 aaPredicted RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 RPL17P18621 184 aaKnown RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 SERPINB3P29508 390 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 VAV2P52735 878 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 AK2P54819 239 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 RPS7P62081 194 aaKnown RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 HTRA4P83105 476 aaPredicted RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 GUCY1B3Q02153 619 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 TAP2Q03519 686 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 SCAPQ12770 1279 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 IFIT5Q13325 482 aaKnown RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 IQCB1Q15051 598 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZIK1Q3SY52 487 aaPredicted RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 KLHDC7AQ5VTJ3 777 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 TMEM108Q6UXF1 575 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 RHOUQ7L0Q8 258 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 C11orf96Q7Z7L8 435 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 MRGPREQ86SM8 312 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 STRBPQ96SI9 672 aaKnown RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 HEPHQ9BQS7 1158 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 ZNF341Q9BYN7 854 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 A1CFQ9NQ94 594 aaKnown RBP5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 NEU2Q9Y3R4 380 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 HS3ST4Q9Y661 456 aa5.25□□□□□ -1.57
RNU6-560P-201ENST00000364007 NPIPB8E9PQR5 432 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 hCG_1984214I3L0E3 225 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 MATN3O15232 486 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 NCK2O43639 380 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 IL18RAPO95256 599 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 IFIT2P09913 472 aaKnown RBP5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 PTGS2P35354 604 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 NPTX2P47972 431 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 TM4SF4P48230 202 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 NDUFV1P49821 464 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 HNRNPMP52272 730 aaKnown RBP eCLIP5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 RHBDL3P58872 404 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 DAG1Q14118 895 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 PREPLQ4J6C6 727 aaPredicted RBP5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 SLC44A4Q53GD3 710 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 SP5Q6BEB4 398 aaPredicted RBP5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 SRLQ86TD4 932 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 ARHGEF19Q8IW93 802 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 FAM9AQ8IZU1 332 aaPredicted RBP5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 SYNE4Q8N205 404 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 SLC30A5Q8TAD4 765 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 PROKR1Q8TCW9 393 aa5.24□□□□□ -1.57
RNU6-560P-201ENST00000364007 ASB10Q8WXI3 467 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms