RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 ANXA11P50995 505 aaKnown RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 P2RX3P56373 397 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 NRG3P56975 720 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 IRX6P78412 446 aaPredicted RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 MC2RQ01718 297 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 EEF1A2Q05639 463 aaKnown RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 PPATQ06203 517 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 PAK2Q13177 524 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 HLXQ14774 488 aaPredicted RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 EPHA7Q15375 998 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 ZRSR1Q15695 479 aaKnown RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 TPRNQ4KMQ1 711 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 ZNF484Q5JVG2 852 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 AFMIDQ63HM1 303 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 ABLIM2Q6H8Q1 611 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 LIN28BQ6ZN17 250 aaKnown RBP eCLIP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 Q7L0L9 218 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 TRILQ7L0X0 811 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 WDR53Q7Z5U6 358 aaPredicted RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 MORC1Q86VD1 984 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 PHYKPLQ8IUZ5 450 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 SLC15A3Q8IY34 581 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 C7orf31Q8N865 590 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 OSR1Q8TAX0 266 aaPredicted RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 TBC1D15Q8TC07 691 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 ZNF398Q8TD17 642 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 MAP4K1Q92918 833 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 ANAPC16Q96DE5 110 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 SGSM3Q96HU1 749 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 SPATA32Q96LK8 384 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 BOCQ9BWV1 1114 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 CELF4Q9BZC1 486 aaKnown RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 TPSD1Q9BZJ3 242 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 CDT1Q9H211 546 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 RETREG1Q9H6L5 497 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 RPS10P5Q9NQ39 176 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 FAM120CQ9NX05 1096 aaKnown RBP0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 CTTNBP2NLQ9P2B4 639 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 GAB2Q9UQC2 676 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 NEU2Q9Y3R4 380 aa0.41□□□□□ -2.34
RNU6-340P-201ENST00000364005 TRAV20A0A0B4J274 112 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 CDHR4A6H8M9 788 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 ELL2O00472 640 aaPredicted RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 TOR1BO14657 336 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 CTIFO43310 598 aaKnown RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 EXOC3O60645 756 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 TMEM127O75204 238 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 ENGP17813 658 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 CTSSP25774 331 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 IL6STP40189 918 aaPredicted RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 GPR15P49685 360 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 SCNN1BP51168 640 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 RPS13P62277 151 aaKnown RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 RACK1P63244 317 aaKnown RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 PHC1P78364 1004 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 SP140Q13342 867 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 PDCD1Q15116 288 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 DMKNQ6E0U4 476 aaPredicted RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 WBP2NLQ6ICG8 309 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 KIRREL2Q6UWL6 708 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 SERPINA13PQ6UXR4 307 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 RFX8Q6ZV50 586 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 OTOP1Q7RTM1 612 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 C16orf82Q7Z2V1 217 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 ARMC9Q7Z3E5 817 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 SRGAP1Q7Z6B7 1085 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 GTSCR1Q86UQ5 136 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 GLB1L2Q8IW92 636 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 TRMT2AQ8IZ69 625 aaKnown RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 ZNF480Q8WV37 535 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 STON2Q8WXE9 905 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 MYOCQ99972 504 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 TRMT61BQ9BVS5 477 aaKnown RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 SF3B5Q9BWJ5 86 aaKnown RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 TLR10Q9BXR5 811 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 TINAGL1Q9GZM7 467 aaPredicted RBP0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 PCIF1Q9H4Z3 704 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 ZNF408Q9H9D4 720 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 DUSP22Q9NRW4 184 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 IGSF9Q9P2J2 1179 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 SLC23A1Q9UHI7 598 aa0.4□□□□□ -2.35
RNU6-340P-201ENST00000364005 CACNA1FO60840 1977 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 AGRNO00468 2067 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 TMEM232C9JQI7 657 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 BMPR1BO00238 502 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 SMAD7O15105 426 aaKnown RBP0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 DIAPH1O60610 1272 aaKnown RBP0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 NDUFB8O95169 186 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 EPN2O95208 641 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 PFKMP08237 780 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 NPTX2P47972 431 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 PDLIM4P50479 330 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 FXR1P51114 621 aaKnown RBP eCLIP0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 CLCN5P51795 746 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 MEF2AQ02078 507 aaPredicted RBP0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 RASA3Q14644 834 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 TMEM177Q53S58 311 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 CCDC178Q5BJE1 867 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 C9orf57Q5W0N0 161 aa0.39□□□□□ -2.35
RNU6-340P-201ENST00000364005 ESRP1Q6NXG1 681 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms