RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ADGRF2Q8IZF7 708 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 YME1L1Q96TA2 773 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 MRPL45Q9BRJ2 306 aaKnown RBP22.01■■□□□ 1.11
SHISA4-201ENST00000362011 C1QTNF1Q9BXJ1 281 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 DEF6Q9H4E7 631 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 CWH43Q9H720 699 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 NHEJ1Q9H9Q4 299 aaPredicted RBP22.01■■□□□ 1.11
SHISA4-201ENST00000362011 CERS4Q9HA82 394 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 PLXNA4Q9HCM2 1894 aa22.01■■□□□ 1.11
SHISA4-201ENST00000362011 TCF20Q9UGU0 1960 aaKnown RBP22■■□□□ 1.11
SHISA4-201ENST00000362011 PTPRDP23468 1912 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 TLL1O43897 1013 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 GJB5O95377 273 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 WARSP23381 471 aaKnown RBP22■■□□□ 1.11
SHISA4-201ENST00000362011 CYLC1P35663 651 aaPredicted RBP22■■□□□ 1.11
SHISA4-201ENST00000362011 SPOUT1Q5T280 376 aaKnown RBP22■■□□□ 1.11
SHISA4-201ENST00000362011 SLC47A2Q86VL8 602 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 CCDC170Q8IYT3 715 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 TMEM86AQ8N2M4 240 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 EPS8L1Q8TE68 723 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 SUSD3Q96L08 255 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 CCDC42Q96M95 316 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 SNX25Q9H3E2 840 aa22■■□□□ 1.11
SHISA4-201ENST00000362011 M0QZQ0 153 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 TADA2AO75478 443 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 ITGB1P05556 798 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 GALTP07902 379 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 CYP11B1P15538 503 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 ANXA13P27216 316 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 PLA2G5P39877 138 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 NDST1P52848 882 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 BCAR1P56945 870 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 HTRA4P83105 476 aaPredicted RBP21.99■■□□□ 1.11
SHISA4-201ENST00000362011 ZNF394Q53GI3 561 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 RAD9BQ6WBX8 426 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 ZNF571Q7Z3V5 609 aaPredicted RBP21.99■■□□□ 1.11
SHISA4-201ENST00000362011 VPS36Q86VN1 386 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 UNC93AQ86WB7 457 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 PDCL2Q8N4E4 241 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 OR6B3Q8NGW1 331 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 SPATA18Q8TC71 538 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 KBTBD7Q8WVZ9 684 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 ZBED2Q9BTP6 218 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 DNAI2Q9GZS0 605 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 ADAM28Q9UKQ2 775 aa21.99■■□□□ 1.11
SHISA4-201ENST00000362011 CARNS1A5YM72 827 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 F8W810 466 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 I3L4J1 428 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 TRAPPC3O43617 180 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 CYP11A1P05108 521 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 PAEPP09466 180 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 GNA15P30679 374 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 RAD23BP54727 409 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 MTF1Q14872 753 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 WSCD1Q658N2 575 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 NOP9Q86U38 636 aaKnown RBP21.98■■□□□ 1.11
SHISA4-201ENST00000362011 METTL23Q86XA0 190 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 WHAMMQ8TF30 809 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 ARNTL2Q8WYA1 636 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 TMEM176AQ96HP8 235 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 AGPAT1Q99943 283 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 NT5C1AQ9BXI3 368 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 ELOVL4Q9GZR5 314 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 MARCH5Q9NX47 278 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 LMCD1Q9NZU5 365 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 HMGXB4Q9UGU5 601 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 DSEQ9UL01 958 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 PCDHB8Q9UN66 801 aa21.98■■□□□ 1.11
SHISA4-201ENST00000362011 A8MXQ7 604 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 THAP12O43422 761 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 AKR1B10O60218 316 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 LAG3P18627 525 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 TNFAIP3P21580 790 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 GNL1P36915 607 aaPredicted RBP21.97■■□□□ 1.11
SHISA4-201ENST00000362011 ALDH7A1P49419 539 aaKnown RBP21.97■■□□□ 1.11
SHISA4-201ENST00000362011 KIF11P52732 1056 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 SKIV2LQ15477 1246 aaKnown RBP21.97■■□□□ 1.11
SHISA4-201ENST00000362011 SPRED2Q7Z698 418 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 ZNF677Q86XU0 584 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 SLC4A11Q8NBS3 891 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 ZNF558Q96NG5 402 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 TWNKQ96RR1 684 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 ACP6Q9NPH0 428 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 NOCTQ9UK39 431 aaKnown RBP21.97■■□□□ 1.11
SHISA4-201ENST00000362011 INSL6Q9Y581 213 aa21.97■■□□□ 1.11
SHISA4-201ENST00000362011 MRPL42Q9Y6G3 142 aaKnown RBP21.97■■□□□ 1.11
SHISA4-201ENST00000362011 EPN1Q9Y6I3 576 aaPredicted RBP21.97■■□□□ 1.11
SHISA4-201ENST00000362011 NT5C1B-RDH14C9J2C7 533 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 NDUFA10O95299 355 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 TYMPP19971 482 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 LHX1P48742 406 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 ELAVL2Q12926 359 aaKnown RBP21.96■■□□□ 1.11
SHISA4-201ENST00000362011 BMS1Q14692 1282 aaKnown RBP21.96■■□□□ 1.11
SHISA4-201ENST00000362011 ASTE1Q2TB18 679 aaPredicted RBP21.96■■□□□ 1.11
SHISA4-201ENST00000362011 OSTM1Q86WC4 334 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 SLC20A1Q8WUM9 679 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 SYT11Q9BT88 431 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.96■■□□□ 1.11
SHISA4-201ENST00000362011 PUF60Q9UHX1 559 aaKnown RBP21.96■■□□□ 1.11
SHISA4-201ENST00000362011 PYCARDQ9ULZ3 195 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms