RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 HIPK3Q9H422 1215 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 SNX12Q9UMY4 172 aa22.29■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TDRD15B5MCY1 1934 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CAPN2P17655 700 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PAX3P23760 479 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 GLB1LQ6UWU2 654 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DBF4BQ8NFT6 615 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DIS3LQ8TF46 1054 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 KBTBD7Q8WVZ9 684 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 UROC1Q96N76 676 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CARD6Q9BX69 1037 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TLR10Q9BXR5 811 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ELAC1Q9H777 363 aaKnown RBP22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ADAM22Q9P0K1 906 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 L1RE1Q9UN81 338 aa22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.28■■□□□ 1.16
MAP1LC3A-201ENST00000360668 BUB1BO60566 1050 aaPredicted RBP22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 FTCDO95954 541 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 POMCP01189 267 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 IBSPP21815 317 aaPredicted RBP22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 MMP8P22894 467 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 WARSP23381 471 aaKnown RBP22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 CLCNKBP51801 687 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 PTP4A2Q12974 167 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TUSC3Q13454 348 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 UPP1Q16831 310 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DENND1BQ6P3S1 775 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 UBE2Q1Q7Z7E8 422 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 DAAM2Q86T65 1068 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 C1orf131Q8NDD1 294 aaKnown RBP22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 OR6B3Q8NGW1 331 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 ZNF564Q8TBZ8 553 aaPredicted RBP22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 NUP85Q9BW27 656 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 TMEM161AQ9NX61 479 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 HYOU1Q9Y4L1 999 aa22.27■■□□□ 1.16
MAP1LC3A-201ENST00000360668 O00370 1275 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ATMINO43313 823 aaPredicted RBP22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CXCL10P02778 98 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CALB1P05937 261 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TCP1P17987 556 aaKnown RBP22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 C11orf63Q6NUN7 778 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 LCLAT1Q6UWP7 414 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 WDTC1Q8N5D0 677 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 UBE2Q2Q8WVN8 375 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 C11orf70Q9BRQ4 267 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SNX25Q9H3E2 840 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ABCB6Q9NP58 842 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 INPP5FQ9Y2H2 1132 aa22.26■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CASTOR2A6NHX0 329 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 A8MXQ7 604 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CYB561D2O14569 222 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ENPP3O14638 875 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 MICAL2O94851 1124 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 RRM1P23921 792 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 GNL1P36915 607 aaPredicted RBP22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 AARSP49588 968 aaKnown RBP eCLIP22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 MMS22LQ6ZRQ5 1243 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 MTERF4Q7Z6M4 381 aaKnown RBP22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ADGRF2Q8IZF7 708 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CRYBG2Q8N1P7 616 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PDCL2Q8N4E4 241 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 UBXN4Q92575 508 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 STXBP5LQ9Y2K9 1186 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 NME7Q9Y5B8 376 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 NCK2O43639 380 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TADA3O75528 432 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 FGFR1P11362 822 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PEX26Q7Z412 305 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 NT5DC3Q86UY8 548 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 URGCPQ8TCY9 931 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SENP8Q96LD8 212 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 OSBPL9Q96SU4 736 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 WNT8AQ9H1J5 351 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 C11orf49Q9H6J7 331 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 KANSL3Q9P2N6 904 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 AMFRQ9UKV5 643 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TBX21Q9UL17 535 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SCINQ9Y6U3 715 aa22.25■■□□□ 1.15
MAP1LC3A-201ENST00000360668 RPS6KA1Q15418 735 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 NOMO2Q5JPE7 1267 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CLLU1OSQ5K130 101 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PLEKHA7Q6IQ23 1121 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ACOT1Q86TX2 421 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ERICH1Q86X53 443 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TMEM86AQ8N2M4 240 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SCLYQ96I15 445 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 MRPL47Q9HD33 250 aaKnown RBP22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CACNG4Q9UBN1 327 aa22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 CHORDC1Q9UHD1 332 aaPredicted RBP22.24■■□□□ 1.15
MAP1LC3A-201ENST00000360668 M0QYV0 167 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 KIF4AO95239 1232 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ARHGAP17Q68EM7 881 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 MSANTD4Q8NCY6 345 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 C3orf58Q8NDZ4 430 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 TSC1Q92574 1164 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 PPP1R12CQ9BZL4 782 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 GOLPH3Q9H4A6 298 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 ATP11BQ9Y2G3 1177 aa22.23■■□□□ 1.15
MAP1LC3A-201ENST00000360668 GABRDO14764 452 aa22.22■■□□□ 1.15
MAP1LC3A-201ENST00000360668 SRGAP2O75044 1071 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms