RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 TFR2Q9UP52 801 aa26.46■■□□□ 1.83
SHARPIN-201ENST00000359551 VWA8A3KMH1 1905 aa26.45■■□□□ 1.83
SHARPIN-201ENST00000359551 ARHGEF37A1IGU5 675 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 NRP1O14786 923 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 KIF5AQ12840 1032 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 ZNF365Q70YC5 407 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 OTOP2Q7RTS6 562 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 PACSIN1Q9BY11 444 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 TSGA10Q9BZW7 698 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 LZTFL1Q9NQ48 299 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 DSEQ9UL01 958 aa26.45■■□□□ 1.82
SHARPIN-201ENST00000359551 O00370 1275 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 ABL1P00519 1130 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 H2AFZP0C0S5 128 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 LMO2P25791 158 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 CDH5P33151 784 aaPredicted RBP26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 LHX1P48742 406 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 SLC11A1P49279 550 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 CENPCQ03188 943 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 CNGA2Q16280 664 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 ARHGAP29Q52LW3 1261 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 SGO2Q562F6 1265 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 PSRC1Q6PGN9 363 aaPredicted RBP26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 H2AFVQ71UI9 128 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 ACOT1Q86TX2 421 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 HASPINQ8TF76 798 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 HEXIM2Q96MH2 286 aaKnown RBP26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 DNAI2Q9GZS0 605 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 HCSTQ9UBK5 93 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 KRT86O43790 486 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 LSM8O95777 96 aaKnown RBP26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 ALDH2P05091 517 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 TYMPP19971 482 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 EPHB4P54760 987 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 NOMO3P69849 1222 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 STILQ15468 1287 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 TMEM240Q5SV17 173 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 ACAD10Q6JQN1 1059 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 CYFIP2Q96F07 1278 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 COLEC11Q9BWP8 271 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 PDCL3Q9H2J4 239 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 CWH43Q9H720 699 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 PCDHB8Q9UN66 801 aa26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 PRG3Q9Y2Y8 225 aaPredicted RBP26.44■■□□□ 1.82
SHARPIN-201ENST00000359551 I3L4J1 428 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 HCRTO43612 131 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 GALTP07902 379 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 GALCP54803 685 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 TNIP3Q96KP6 325 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 ZNF518BQ9C0D4 1074 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 LHX5Q9H2C1 402 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 DPEP3Q9H4B8 488 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 MARCH5Q9NX47 278 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 FAN1Q9Y2M0 1017 aa26.43■■□□□ 1.82
SHARPIN-201ENST00000359551 KIAA1671Q9BY89 1806 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 ANKRD62A6NC57 917 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 BTNL10A8MVZ5 291 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 TMCO5BA8MYB1 307 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 FTLP02792 175 aaPredicted RBP26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 TMEM253P0C7T8 217 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 ARHGAP17Q68EM7 881 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 PPP1R2P3Q6NXS1 205 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 LCLAT1Q6UWP7 414 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 DNAAF5Q86Y56 855 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 CMTR2Q8IYT2 770 aaKnown RBP26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 DDX43Q9NXZ2 648 aaKnown RBP26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 TRIM10Q9UDY6 481 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 ADAM28Q9UKQ2 775 aa26.42■■□□□ 1.82
SHARPIN-201ENST00000359551 TRAPPC3O43617 180 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 PDGFRBP09619 1106 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 SYN1P17600 705 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 C12orf29Q8N999 325 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.41■■□□□ 1.822e-7■■■□□ 16.6
SHARPIN-201ENST00000359551 TIMM13Q9Y5L4 95 aaPredicted RBP26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 DUSP10Q9Y6W6 482 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 MYH10P35580 1976 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 TADA2AO75478 443 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 BCAR1P56945 870 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 PTPN14Q15678 1187 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 NAA35Q5VZE5 725 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 TMCO2Q7Z6W1 182 aaPredicted RBP26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 METTL23Q86XA0 190 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 PASD1Q8IV76 773 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 TMEM35BQ8NCS4 154 aa26.41■■□□□ 1.82
SHARPIN-201ENST00000359551 SSTR3P32745 418 aaPredicted RBP26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 DENND1BQ6P3S1 775 aa26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 PHF13Q86YI8 300 aaPredicted RBP26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 WDTC1Q8N5D0 677 aa26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 B3GALNT2Q8NCR0 500 aa26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 HERVK_113Q902F9 699 aa26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 C16orf45Q96MC5 204 aaPredicted RBP26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 RTP3Q9BQQ7 232 aa26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 ZMYND8Q9ULU4 1186 aaPredicted RBP26.4■■□□□ 1.82
SHARPIN-201ENST00000359551 NCANO14594 1321 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 A0A0A6YYK5 440 aaPredicted RBP26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 CCDC85CA6NKD9 419 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 SYN3O14994 580 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 MICAL2O94851 1124 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 PPP1R26Q5T8A7 1209 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms