RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 OTUD4Q01804 1114 aaKnown RBP8.72□□□□□ -1.01
CD46-205ENST00000358170 C1orf228Q6PIY5 440 aa8.72□□□□□ -1.01
CD46-205ENST00000358170 CATSPERGQ6ZRH7 1159 aa8.72□□□□□ -1.01
CD46-205ENST00000358170 ARHGEF18Q6ZSZ5 1173 aa8.72□□□□□ -1.01
CD46-205ENST00000358170 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
CD46-205ENST00000358170 PYROXD1Q8WU10 500 aa8.72□□□□□ -1.01
CD46-205ENST00000358170 SLITRK1Q96PX8 696 aa8.72□□□□□ -1.01
CD46-205ENST00000358170 ATP8B3O60423 1300 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 LIASO43766 372 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 LDHAP00338 332 aaKnown RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 GBP2P32456 591 aaPredicted RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 MAN1A1P33908 653 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 RPA3P35244 121 aaPredicted RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 TGFB2P61812 414 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 ELF3P78545 371 aaPredicted RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 RNASELQ05823 741 aaKnown RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 LAMTOR4Q0VGL1 99 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 MYO1EQ12965 1108 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 MKRN3Q13064 507 aaKnown RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 TFDP1Q14186 410 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 RAB6CQ53S08 254 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 SH3PXD2AQ5TCZ1 1133 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 ANKRD22Q5VYY1 191 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 RHBDF2Q6PJF5 856 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 C15orf39Q6ZRI6 1047 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 PIGWQ7Z7B1 504 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 FBXO16Q8IX29 292 aaPredicted RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 CTAGE3PQ8IX95 158 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 FITM2Q8N6M3 262 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 MTMR14Q8NCE2 650 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 RDM1Q8NG50 284 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 EXD1Q8NHP7 514 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 CENPTQ96BT3 561 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 HEXIM2Q96MH2 286 aaKnown RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 TMEM237Q96Q45 408 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 SMC6Q96SB8 1091 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 MRPL4Q9BYD3 311 aaKnown RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 RAB6CQ9H0N0 254 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 PDLIM7Q9NR12 457 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 METTL5Q9NRN9 209 aaKnown RBP8.71□□□□□ -1.01
CD46-205ENST00000358170 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 BTBD7Q9P203 1132 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 HEY1Q9Y5J3 304 aa8.71□□□□□ -1.01
CD46-205ENST00000358170 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ATP2A1O14983 1001 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ASAP2O43150 1006 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ADCY3O60266 1144 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ZC3H11AO75152 810 aaKnown RBP eCLIP8.71□□□□□ -1.022e-9■■■■■ 26.8
CD46-205ENST00000358170 TNNC2P02585 160 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 KRT4P19013 534 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 MMP8P22894 467 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 TBXAS1P24557 533 aaPredicted RBP8.71□□□□□ -1.02
CD46-205ENST00000358170 IL9RQ01113 521 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ZNF252P-AS1Q0IIN9 211 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 MMRN1Q13201 1228 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.02
CD46-205ENST00000358170 PLEKHA7Q6IQ23 1121 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 NPNTQ6UXI9 565 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 C3orf62Q6ZUJ4 267 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ZBTB8OSQ8IWT0 167 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 SUGP1Q8IWZ8 645 aaKnown RBP8.71□□□□□ -1.02
CD46-205ENST00000358170 RCOR2Q8IZ40 523 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 C12orf50Q8NA57 414 aaPredicted RBP8.71□□□□□ -1.02
CD46-205ENST00000358170 NETO2Q8NC67 525 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ZBED3Q96IU2 234 aaPredicted RBP8.71□□□□□ -1.02
CD46-205ENST00000358170 CFAP57Q96MR6 1250 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 PCYT2Q99447 389 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 DHX33Q9H6R0 707 aaKnown RBP8.71□□□□□ -1.02
CD46-205ENST00000358170 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 ETNK1Q9HBU6 452 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 NOD2Q9HC29 1040 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 MAP3K20Q9NYL2 800 aaKnown RBP8.71□□□□□ -1.02
CD46-205ENST00000358170 CHMP2BQ9UQN3 213 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 DOCK5Q9H7D0 1870 aa8.71□□□□□ -1.02
CD46-205ENST00000358170 TMEM191CA6NGB0 347 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 FAM47DPA6NHR8 397 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 PSTPIP1O43586 416 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 EZRP15311 586 aaKnown RBP8.7□□□□□ -1.02
CD46-205ENST00000358170 TARSP26639 723 aaKnown RBP8.7□□□□□ -1.02
CD46-205ENST00000358170 CTCFP49711 727 aaPredicted RBP8.7□□□□□ -1.02
CD46-205ENST00000358170 ALDH5A1P51649 535 aaPredicted RBP8.7□□□□□ -1.02
CD46-205ENST00000358170 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
CD46-205ENST00000358170 TMEM62Q0P6H9 643 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 KLF1Q13351 362 aaPredicted RBP8.7□□□□□ -1.02
CD46-205ENST00000358170 ACCSLQ4AC99 568 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 POTEAQ6S8J7 498 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 FAM228AQ86W67 206 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 ZNF677Q86XU0 584 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 KATNAL2Q8IYT4 538 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 SEPT1Q8WYJ6 367 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 ERP27Q96DN0 273 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 STAMBPL1Q96FJ0 436 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 CPB2Q96IY4 423 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 RBM41Q96IZ5 413 aaKnown RBP8.7□□□□□ -1.02
CD46-205ENST00000358170 SPATA33Q96N06 139 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 NIF3L1Q9GZT8 377 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 HMGXB4Q9UGU5 601 aa8.7□□□□□ -1.02
CD46-205ENST00000358170 TCRBV7S3A2A0A539 114 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms