RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 BOLA3Q53S33 107 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 PRUNE1Q86TP1 453 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 EXD1Q8NHP7 514 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 RMDN2Q96LZ7 410 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 EPAS1Q99814 870 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 DTNAQ9Y4J8 743 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 SRRM3A6NNA2 597 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 MAN1A2O60476 641 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 SKAP2O75563 359 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 HSD17B4P51659 736 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 FLOT2Q14254 428 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 TFDP3Q5H9I0 405 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 NAIF1Q69YI7 327 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 IFNEQ86WN2 208 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 PCYOX1LQ8NBM8 494 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 PAFAH2Q99487 392 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 GNAT1P11488 350 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 MUTP22033 750 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 TPI1P60174 286 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 AMPD2Q01433 879 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 MYBPC2Q14324 1141 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 TTLL4Q14679 1199 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 KYAT1Q16773 422 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 CYP4A22Q5TCH4 519 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 TATDN2Q93075 761 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 TBC1D23Q9NUY8 699 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 CCDC78A2IDD5 438 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 GPD1P21695 349 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 MCL1Q07820 350 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 SCN4BQ8IWT1 228 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 MREGQ8N565 214 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
TRAPPC11-202ENST00000357207 TNFRSF8P28908 595 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 FAXCQ5TGI0 409 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 TAS1R2Q8TE23 839 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 KRT35Q92764 455 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 MAFGO15525 162 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 GFAPP14136 432 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 IREB2P48200 963 aaKnown RBP16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 PSMC6P62333 389 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 IMPG1Q17R60 797 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 E2F8A0AVK6 867 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 PYGMP11217 842 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 RASA2Q15283 850 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 WASHC2DQ5SRD0 308 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 ANGPTL8Q6UXH0 198 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 SLC47A2Q86VL8 602 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZNF560Q96MR9 790 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 GPRC5CQ9NQ84 441 aa16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 PAIP2BQ9ULR5 123 aaKnown RBP16.28■□□□□ 0.2
TRAPPC11-202ENST00000357207 UBA6A0AVT1 1052 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 DGKIO75912 1065 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ABCE1P61221 599 aaKnown RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 OTUD4Q01804 1114 aaKnown RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 FOXD4Q12950 439 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 FRMD8P1Q9BZ68 369 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 SARS2Q9NP81 518 aaKnown RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 RARAP10276 462 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ALDH5A1P51649 535 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ITGB3BPQ13352 177 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 TMEM139Q8IV31 216 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 PTPRN2Q92932 1015 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ZNF669Q96BR6 464 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 NT5C1AQ9BXI3 368 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ADNPQ9H2P0 1102 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 METTL5Q9NRN9 209 aaKnown RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 SCHIP1Q9P0W5 487 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-202ENST00000357207 ELF3P78545 371 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 SPDYCQ5MJ68 293 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 TMEM121Q9BTD3 319 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 ASPSCR1Q9BZE9 553 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 CDYLQ9Y232 598 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 XPO1O14980 1071 aaKnown RBP16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 MOCS2O96007 188 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 KCNA2P16389 499 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 COG2Q14746 738 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 PDK1Q15118 436 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 THEM5Q8N1Q8 247 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 CAAP1Q9H8G2 361 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 LZTS1Q9Y250 596 aa16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 KDM6AO15550 1401 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC11-202ENST00000357207 AQP5P55064 265 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 NLRP11P59045 1033 aaKnown RBP16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 SNX30Q5VWJ9 437 aa16.26■□□□□ 0.19
TRAPPC11-202ENST00000357207 PDCD6IPQ8WUM4 868 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms