RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DPY19L2Q6NUT2 758 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 LRRC55Q6ZSA7 311 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 NUP93Q8N1F7 819 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 HIPK4Q8NE63 616 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 C7orf26Q96N11 449 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 POLR3CQ9BUI4 534 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 GIN1Q9NXP7 522 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 K7ENM7 598 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ZBED1O96006 694 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SHBGP04278 402 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 MAPTP10636 758 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 FCER1AP12319 257 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 UQCRBP14927 111 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ATF7P17544 494 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 RTP1P59025 263 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 CCNG2Q16589 344 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 RGS21Q2M5E4 152 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 CEP55Q53EZ4 464 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 RFX8Q6ZV50 586 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PACRGLQ8N7B6 248 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 AGPAT1Q99943 283 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SENP7Q9BQF6 1050 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ZNF277Q9NRM2 450 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 BARX2Q9UMQ3 279 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PRR23AA6NEV1 266 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 MAGEB2O15479 319 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 C7P10643 843 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ADSLP30566 484 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TUBA1BP68363 451 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 FLOT2Q14254 428 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TUBA1AQ71U36 451 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 COLGALT2Q8IYK4 626 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 OR6Y1Q8NGX8 325 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ACMSDQ8TDX5 336 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TBCKQ8TEA7 893 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 UCMAQ8WVF2 138 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TOP1MTQ969P6 601 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 BTBD6Q96KE9 485 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SYT15Q9BQS2 421 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 THTPAQ9BU02 230 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TRPC7Q9HCX4 862 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SPATA7Q9P0W8 599 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PCDHGA4Q9Y5G9 962 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 NUP98P52948 1817 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 LAMB2P55268 1798 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TMEM114B3SHH9 223 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 F8W031 263 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 KRT8P05787 483 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SERPINA6P08185 405 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 GALK1P51570 392 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ZNF211Q13398 564 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 AUHQ13825 339 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 C16orf72Q14CZ0 275 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TSC22D1Q15714 1073 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 TXNRD1Q16881 649 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 NT5DC3Q86UY8 548 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ZBED8Q8IZ13 594 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ZNF420Q8TAQ5 688 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 GLG1Q92896 1179 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 GRIP2Q9C0E4 1043 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PCDH9Q9HC56 1237 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 AVENQ9NQS1 362 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 CLIC5Q9NZA1 410 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 SNRPAP09012 282 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 RAP1GDS1P52306 607 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 DMPKQ09013 629 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 RSBN1LQ6PCB5 846 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 RBM44Q6ZP01 1051 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 AHI1Q8N157 1196 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 DENND2DQ9H6A0 471 aaPredicted RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 ARHGEF10LQ9HCE6 1279 aa6.87□□□□□ -1.31
TRIM38-201ENST00000357085 PRPF19Q9UMS4 504 aaKnown RBP6.87□□□□□ -1.31
TRIM38-201ENST00000357085 GOLGA8JA6NMD2 632 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 H0Y626 953 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 CAMTA2O94983 1202 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 TRIM16O95361 564 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 IFNB1P01574 187 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 MAGEA4P43358 317 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 PURAQ00577 322 aaKnown RBP6.86□□□□□ -1.31
TRIM38-201ENST00000357085 PIGHQ14442 188 aaPredicted RBP6.86□□□□□ -1.31
TRIM38-201ENST00000357085 CYTH1Q15438 398 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 ODR4Q5SWX8 454 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 ADCY4Q8NFM4 1077 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 FBXO25Q8TCJ0 367 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 OSBPL10Q9BXB5 764 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 CDC42EP4Q9H3Q1 356 aaKnown RBP6.86□□□□□ -1.31
TRIM38-201ENST00000357085 VTI1BQ9UEU0 232 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 USP20Q9Y2K6 914 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 PEX11AO75192 247 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 GALCP54803 685 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 PDK3Q15120 406 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 C18orf8Q96DM3 657 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 SGF29Q96ES7 293 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 ANKRD36BP1Q96IX9 119 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 APOL4Q9BPW4 351 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 ZC4H2Q9NQZ6 224 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 ANKRD6Q9Y2G4 727 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 CROCCQ5TZA2 2017 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 SYCE1LA8MT33 242 aa6.86□□□□□ -1.31
TRIM38-201ENST00000357085 C6orf229H3BNL8 230 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms