RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ARHGAP29Q52LW3 1261 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 CRELD2Q6UXH1 353 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-204ENST00000356316 ERMP1Q7Z2K6 904 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 TMC8Q8IU68 726 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 CSGALNACT2Q8N6G5 542 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 OR10T2Q8NGX3 314 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 GIPC2Q8TF65 315 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 DNAJC19Q96DA6 116 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 DNAJC25Q9H1X3 360 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 C8orf33Q9H7E9 229 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-204ENST00000356316 OLFML3Q9NRN5 406 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 ABI2Q9NYB9 513 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-204ENST00000356316 RBAKQ9NYW8 714 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-204ENST00000356316 ZMYM5Q9UJ78 669 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 PCDHB5Q9Y5E4 795 aa11.49□□□□□ -0.57
CAPN3-204ENST00000356316 FANCMQ8IYD8 2048 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 PTPRZ1P23471 2315 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-204ENST00000356316 DMXL1Q9Y485 3027 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-204ENST00000356316 STX6O43752 255 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 EXTL3O43909 919 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 PPP1R37O75864 691 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 ITGB3P05106 788 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 KRT19P08727 400 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 GARTP22102 1010 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 ADSSP30520 456 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 CCR3P51677 355 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 CDR1P51861 262 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 AMPD3Q01432 767 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 MYL7Q01449 175 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 KCNA1Q09470 495 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 FCHO2Q0JRZ9 810 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 FZD5Q13467 585 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 NFE2Q16621 373 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-204ENST00000356316 TSSK4Q6SA08 328 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 EFCAB13Q8IY85 973 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 TTC9BQ8N6N2 239 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 GPR161Q8N6U8 529 aaKnown RBP11.48□□□□□ -0.57
CAPN3-204ENST00000356316 PDILTQ8N807 584 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 SAAL1Q96ER3 474 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 ZNF396Q96N95 335 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-204ENST00000356316 USP28Q96RU2 1077 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 LPIN3Q9BQK8 851 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 IKZF4Q9H2S9 585 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 CHRDQ9H2X0 955 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 TASP1Q9H6P5 420 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 RAB23Q9ULC3 237 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 SCN1AP35498 2009 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 CACNA1IQ9P0X4 2223 aa11.48□□□□□ -0.57
CAPN3-204ENST00000356316 ZNF292O60281 2723 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 GOLGA8IPA6NC78 632 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 GOLGA8JA6NMD2 632 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 SLC38A8A6NNN8 435 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 KIAA0391O15091 583 aaKnown RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 PRPF40AO75400 957 aaKnown RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 TMEM191BP0C7N4 346 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 POLR2BP30876 1174 aaKnown RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 AVPR1AP37288 418 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 CXCL12P48061 93 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 RPL10AP62906 217 aaKnown RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 RBP5P82980 135 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 BFSP1Q12934 665 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 MYO1EQ12965 1108 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 SURF1Q15526 300 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 STXBP5Q5T5C0 1151 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 GAREM2Q75VX8 874 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 LRRTM3Q86VH5 581 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 RALGPS2Q86X27 583 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 BRSK2Q8IWQ3 736 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 TMEM86AQ8N2M4 240 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 DCLK2Q8N568 766 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 CELF5Q8N6W0 485 aaKnown RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 SUMF1Q8NBK3 374 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 ZBTB44Q8NCP5 570 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 BPIFB1Q8TDL5 484 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 PCIF1Q9H4Z3 704 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 OBP2AQ9NY56 170 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 MTMR6Q9Y217 621 aa11.47□□□□□ -0.57
CAPN3-204ENST00000356316 MORC2Q9Y6X9 1032 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-204ENST00000356316 ZNF233A6NK53 670 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 PRPF6O94906 941 aaKnown RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 HSP90AA1P07900 732 aaKnown RBP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 CSH1P0DML2 217 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 CSH2P0DML3 217 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 CHRNB1P11230 501 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 ATF6P18850 670 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 DDX6P26196 483 aaKnown RBP eCLIP11.46□□□□□ -0.57
CAPN3-204ENST00000356316 WEE1P30291 646 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 LHX1P48742 406 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 CASP5P51878 434 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 CYP4F8P98187 520 aa11.46□□□□□ -0.57
CAPN3-204ENST00000356316 AMPD2Q01433 879 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms